Triple
T10837738
| Position | Surface form | Disambiguated ID | Type / Status |
|---|---|---|---|
| Subject | Bruton tyrosine kinase |
E255805
|
entity |
| Predicate | expressedInCellType |
P95984
|
FINISHED |
| Object | B lymphocyte |
E261828
|
NE FINISHED |
How this triple was built (3 steps)
Every LLM step that produced this triple, in pipeline order — named-entity classification, the disambiguation choices (the exact options shown, with the pick highlighted), and the generated description. The batch + timestamp of each is in the Provenance table below.
NER
Named-entity recognition
gpt-5-mini
Instruction
Given a phrase, classify it is english named entity (e.g., persons, organizations, works of art) in Latin script, or not (e.g., literals, dates, URLs, verbose phrases). For disambiguation, the statement where the phrase occurs as object is also given. Please return a JSON object with `phrase` (string, the phrase being analyzed) and `is_ne` (boolean, indicating whether the phrase is a Named Entity).
Input
Phrase: B lymphocyte | Statement: [Bruton tyrosine kinase, expressedInCellType, B lymphocyte]
NED1
Entity disambiguation (via context triple)
gpt-5-mini-2025-08-07
Target entity: B lymphocyte Context triple: [Bruton tyrosine kinase, expressedInCellType, B lymphocyte]
-
A.
B lymphocytes
chosen
B lymphocytes are a type of white blood cell central to the adaptive immune system, responsible for producing antibodies and mediating humoral immunity.
-
B.
CD4+ T cells
CD4+ T cells are a subset of immune cells that coordinate and regulate the body’s adaptive immune response, playing a central role in defending against infections.
-
C.
CD20 protein
CD20 protein is a cell-surface antigen found primarily on B lymphocytes and is a key therapeutic target in certain autoimmune diseases and B-cell malignancies.
-
D.
Hamburg cell
The Hamburg cell was a small group of radical Islamist extremists based in Hamburg, Germany, that played a central planning and operational role in the September 11, 2001 terrorist attacks in the United States.
-
E.
Bruton tyrosine kinase
Bruton tyrosine kinase is a key signaling enzyme in B cells that plays a crucial role in their development and function and is a major therapeutic target in certain blood cancers and autoimmune diseases.
- F. None of above.
- G. Unsure - the case is ambiguous/there is not enough information to decide.
PD
Predicate disambiguation
gpt-5-mini-2025-08-07
Target predicate: expressedInCellType Context triple: [Bruton tyrosine kinase, expressedInCellType, B lymphocyte]
-
A.
cellType
Indicates the classification relationship that specifies what type of cell an entity is or is associated with.
-
B.
affectsCellType
Indicates that one entity produces an effect or change on a specific type of cell.
-
C.
tissueExpression
Indicates the association between a biological entity (such as a gene or protein) and the specific tissue(s) in which it is expressed.
-
D.
antigensExpressedOn
Indicates that specific antigens are present on the surface of a given cell or biological structure.
-
E.
expressedOn
Indicates that something (such as a feature, marker, or characteristic) is present or manifested on a particular entity or surface.
- F. None of above. chosen
Provenance (5 batches)
The batch behind each pipeline step, in order, with when it ran. Timestamps are batch-level — stages were processed in waves, so the object chain (NER → NED1 → NEDg → NED2) reads in order, but predicate / elicitation batches can sit in a different wave.
| Step | Stage | Batch ID | Status | When |
|---|---|---|---|---|
| creating | Elicitation | batch_69d6aa81a5d08190aa86689061d1ddd2 |
completed | April 8, 2026, 7:20 p.m. |
| NER | Named-entity recognition | batch_69d747002b3081908726901ee83d8f38 |
completed | April 9, 2026, 6:28 a.m. |
| NED1 | Entity disambiguation (via context triple) | batch_69deb139072081908a67e76a83575c32 |
completed | April 14, 2026, 9:27 p.m. |
| PD | Predicate disambiguation | batch_69d70d25280c8190b648d7d1958b413a |
completed | April 9, 2026, 2:21 a.m. |
| PDg | Predicate description generation | batch_69d7101c96708190808fef73199e8482 |
completed | April 9, 2026, 2:34 a.m. |
Created at: April 8, 2026, 9:19 p.m.