EMBL-EBI AlphaFold Protein Structure Database
E200556
The EMBL-EBI AlphaFold Protein Structure Database is a publicly accessible resource providing predicted 3D structures of proteins generated by DeepMind’s AlphaFold system.
All labels observed (1)
| Label | Occurrences |
|---|---|
| EMBL-EBI AlphaFold Protein Structure Database canonical | 1 |
Statements (48)
| Predicate | Object |
|---|---|
| instanceOf |
bioinformatics resource
ⓘ
protein structure database ⓘ scientific database ⓘ |
| accessPolicy |
open access
ⓘ
publicly accessible ⓘ |
| computes |
per-residue confidence metrics
ⓘ
predicted local distance difference test (pLDDT) scores ⓘ |
| dataType |
3D coordinates
ⓘ
predicted models ⓘ protein structure ⓘ |
| developedInCollaborationWith | DeepMind ⓘ |
| domain |
bioinformatics
ⓘ
structural biology ⓘ |
| focusesOn |
proteomes of multiple species
ⓘ
reference proteomes ⓘ |
| hasFeature |
API access
ⓘ
confidence score per residue ⓘ downloadable structure files ⓘ search by protein identifier ⓘ visualization of 3D structures ⓘ |
| hasPartner | DeepMind ⓘ |
| hasProvider |
European Bioinformatics Institute
ⓘ
surface form:
EMBL-EBI
|
| hostedAt |
European Bioinformatics Institute
ⓘ
surface form:
EMBL-EBI Hinxton campus
|
| license | open data license ⓘ |
| maintainedBy |
European Bioinformatics Institute
ⓘ
surface form:
EMBL-EBI
|
| operatedBy |
European Bioinformatics Institute
ⓘ
surface form:
EMBL-EBI
European Bioinformatics Institute ⓘ |
| outputFormat |
PDB format
ⓘ
mmCIF format ⓘ |
| predictionAlgorithm |
deep learning
ⓘ
neural networks ⓘ |
| primaryInput | protein sequences ⓘ |
| provides |
predicted protein 3D structures
ⓘ
protein structure models ⓘ |
| relatedTo |
Ensembl
ⓘ
Protein Data Bank ⓘ UniProt protein sequences ⓘ
surface form:
UniProt
|
| supportsUseCase |
comparative modeling
ⓘ
drug discovery research ⓘ functional annotation of proteins ⓘ protein engineering ⓘ protein structure prediction ⓘ structural bioinformatics research ⓘ |
| targetUser |
bioinformaticians
ⓘ
drug discovery researchers ⓘ research scientists ⓘ structural biologists ⓘ |
| usesMethod | AlphaFold ⓘ |
Referenced by (1)
Full triples — surface form annotated when it differs from this entity's canonical label.