Triple
T38560493
| Position | Surface form | Disambiguated ID | Type / Status |
|---|---|---|---|
| Subject | Bacillus subtilis |
E928065
|
entity |
| Predicate | modelStrain |
P58885
|
FINISHED |
| Object | Bacillus subtilis 168 |
—
|
NE NERFINISHED |
How this triple was built (2 steps)
Every LLM step that produced this triple, in pipeline order — named-entity classification, the disambiguation choices (the exact options shown, with the pick highlighted), and the generated description. The batch + timestamp of each is in the Provenance table below.
NER
Named-entity recognition
gpt-5-mini
Instruction
Given a phrase, classify it is english named entity (e.g., persons, organizations, works of art) in Latin script, or not (e.g., literals, dates, URLs, verbose phrases). For disambiguation, the statement where the phrase occurs as object is also given. Please return a JSON object with `phrase` (string, the phrase being analyzed) and `is_ne` (boolean, indicating whether the phrase is a Named Entity).
Input
Phrase: Bacillus subtilis 168 | Statement: [Bacillus subtilis, modelStrain, Bacillus subtilis 168]
PD
Predicate disambiguation
gpt-5-mini-2025-08-07
Target predicate: modelStrain Context triple: [Bacillus subtilis, modelStrain, Bacillus subtilis 168]
-
A.
labStrain
chosen
Indicates a relationship where an organism or sample is identified as a specific laboratory strain, typically maintained or derived under controlled lab conditions.
-
B.
targetStrain
Indicates that one entity is the specific strain (e.g., genetic, microbial, or biological variant) that is the focus or objective of another entity’s action, study, or effect.
-
C.
strainType
Indicates the specific variety or subtype classification within a broader category of strains (e.g., biological, chemical, or product strains).
-
D.
hasSignatureStrain
Indicates that an entity is associated with a particular defining or characteristic strain that serves as its signature.
-
E.
breed
Indicates that an organism reproduces to generate offspring, typically with another organism of the same species.
- F. None of above.
Provenance (3 batches)
The batch behind each pipeline step, in order, with when it ran. Timestamps are batch-level — stages were processed in waves, so the object chain (NER → NED1 → NEDg → NED2) reads in order, but predicate / elicitation batches can sit in a different wave.
| Step | Stage | Batch ID | Status | When |
|---|---|---|---|---|
| creating | Elicitation | batch_69f76eb8d1808190a588af29d8b266d6 |
completed | May 3, 2026, 3:50 p.m. |
| NER | Named-entity recognition | batch_69fcdaa36f90819093f8661969990c7d |
completed | May 7, 2026, 6:32 p.m. |
| PD | Predicate disambiguation | batch_69fcd8fefc588190b063d7ea1ec87b07 |
completed | May 7, 2026, 6:25 p.m. |
Created at: May 3, 2026, 4:32 p.m.