Triple
T36659913
| Position | Surface form | Disambiguated ID | Type / Status |
|---|---|---|---|
| Subject | CYP3A5 |
E905090
|
entity |
| Predicate | lowOrAbsentExpressionIn |
P101312
|
FINISHED |
| Object | CYP3A5*3 homozygotes |
—
|
LITERAL FINISHED |
How this triple was built (2 steps)
Every LLM step that produced this triple, in pipeline order — named-entity classification, the disambiguation choices (the exact options shown, with the pick highlighted), and the generated description. The batch + timestamp of each is in the Provenance table below.
NER
Named-entity recognition
gpt-5-mini
Instruction
Given a phrase, classify it is english named entity (e.g., persons, organizations, works of art) in Latin script, or not (e.g., literals, dates, URLs, verbose phrases). For disambiguation, the statement where the phrase occurs as object is also given. Please return a JSON object with `phrase` (string, the phrase being analyzed) and `is_ne` (boolean, indicating whether the phrase is a Named Entity).
Input
Phrase: CYP3A5*3 homozygotes | Statement: [CYP3A5, lowOrAbsentExpressionIn, CYP3A5*3 homozygotes]
PD
Predicate disambiguation
gpt-5-mini-2025-08-07
Target predicate: lowOrAbsentExpressionIn Context triple: [CYP3A5, lowOrAbsentExpressionIn, CYP3A5*3 homozygotes]
-
A.
hasLowExpressionIn
chosen
Indicates that a given entity (such as a gene or protein) is present at a relatively low level or activity within a specified context, such as a tissue, cell type, or condition.
-
B.
hasLow
Indicates that an entity possesses a value, level, or amount of something that is below a defined or expected threshold.
-
C.
hasLowForm
Indicates that an entity possesses a lower or less developed form, version, or level of something relative to a standard or comparison.
-
D.
lowerValueIndicates
Indicates that a smaller numerical value of a property or measurement corresponds to a greater degree, better outcome, or stronger presence of the relevant characteristic.
-
E.
existsBelow
Indicates that at least one instance of an entity is located or occurs at a lower level or position relative to another entity.
- F. None of above.
Provenance (3 batches)
The batch behind each pipeline step, in order, with when it ran. Timestamps are batch-level — stages were processed in waves, so the object chain (NER → NED1 → NEDg → NED2) reads in order, but predicate / elicitation batches can sit in a different wave.
| Step | Stage | Batch ID | Status | When |
|---|---|---|---|---|
| creating | Elicitation | batch_69f76e6e3b908190970251b30f76ad71 |
completed | May 3, 2026, 3:49 p.m. |
| NER | Named-entity recognition | batch_69f7c77b118881908cad488643e61e8a |
completed | May 3, 2026, 10:08 p.m. |
| PD | Predicate disambiguation | batch_69f7c4796ebc819084a0dc08505e5f14 |
completed | May 3, 2026, 9:56 p.m. |
Created at: May 3, 2026, 4:11 p.m.