Triple
T36618834
| Position | Surface form | Disambiguated ID | Type / Status |
|---|---|---|---|
| Subject | epidermal growth factor receptor family |
E903677
|
entity |
| Predicate | molecularAbnormality |
P186083
|
FINISHED |
| Object | overexpression |
—
|
LITERAL FINISHED |
How this triple was built (2 steps)
Every LLM step that produced this triple, in pipeline order — named-entity classification, the disambiguation choices (the exact options shown, with the pick highlighted), and the generated description. The batch + timestamp of each is in the Provenance table below.
NER
Named-entity recognition
gpt-5-mini
Instruction
Given a phrase, classify it is english named entity (e.g., persons, organizations, works of art) in Latin script, or not (e.g., literals, dates, URLs, verbose phrases). For disambiguation, the statement where the phrase occurs as object is also given. Please return a JSON object with `phrase` (string, the phrase being analyzed) and `is_ne` (boolean, indicating whether the phrase is a Named Entity).
Input
Phrase: overexpression | Statement: [epidermal growth factor receptor family, molecularAbnormality, overexpression]
PD
Predicate disambiguation
gpt-5-mini-2025-08-07
Target predicate: molecularAbnormality Context triple: [epidermal growth factor receptor family, molecularAbnormality, overexpression]
-
A.
molecularConsequence
Indicates the specific effect or change that a genetic variant has at the molecular level, such as how it alters a gene’s sequence or product.
-
B.
hasMolecularConsequence
Indicates the specific effect or outcome that a molecular event (such as a genetic variant) has at the molecular level, such as on a gene, transcript, or protein.
-
C.
hasUnusualMorphology
Indicates that an entity possesses structural or anatomical features that deviate significantly from what is typical or expected for its kind.
-
D.
genomicAlteration
Indicates a relationship where an entity has undergone a change or mutation in its genetic material compared to a reference genome.
-
E.
molecularFunction
Indicates the specific biochemical activity or role that a molecule (typically a gene product or protein) performs at the molecular level.
- F. None of above. chosen
Provenance (4 batches)
The batch behind each pipeline step, in order, with when it ran. Timestamps are batch-level — stages were processed in waves, so the object chain (NER → NED1 → NEDg → NED2) reads in order, but predicate / elicitation batches can sit in a different wave.
| Step | Stage | Batch ID | Status | When |
|---|---|---|---|---|
| creating | Elicitation | batch_69f76e6960e4819092047756ceb9a17e |
completed | May 3, 2026, 3:48 p.m. |
| NER | Named-entity recognition | batch_69f7c83f5960819089610ed39c839678 |
completed | May 3, 2026, 10:12 p.m. |
| PD | Predicate disambiguation | batch_69f7c477a4d481908f52e55b6688f60c |
completed | May 3, 2026, 9:56 p.m. |
| PDg | Predicate description generation | batch_69f7c776b4088190bef550c869da530d |
completed | May 3, 2026, 10:08 p.m. |
Created at: May 3, 2026, 4:11 p.m.