Triple
T33456864
| Position | Surface form | Disambiguated ID | Type / Status |
|---|---|---|---|
| Subject | ABCG2 |
E856800
|
entity |
| Predicate | Q141KVariantAssociatedWith |
P133002
|
FINISHED |
| Object | reduced transporter activity |
—
|
LITERAL FINISHED |
How this triple was built (2 steps)
Every LLM step that produced this triple, in pipeline order — named-entity classification, the disambiguation choices (the exact options shown, with the pick highlighted), and the generated description. The batch + timestamp of each is in the Provenance table below.
NER
Named-entity recognition
gpt-5-mini
Instruction
Given a phrase, classify it is english named entity (e.g., persons, organizations, works of art) in Latin script, or not (e.g., literals, dates, URLs, verbose phrases). For disambiguation, the statement where the phrase occurs as object is also given. Please return a JSON object with `phrase` (string, the phrase being analyzed) and `is_ne` (boolean, indicating whether the phrase is a Named Entity).
Input
Phrase: reduced transporter activity | Statement: [ABCG2, Q141KVariantAssociatedWith, reduced transporter activity]
PD
Predicate disambiguation
gpt-5-mini-2025-08-07
Target predicate: Q141KVariantAssociatedWith Context triple: [ABCG2, Q141KVariantAssociatedWith, reduced transporter activity]
-
A.
riskAlleleForDisease
Indicates that a specific allele is associated with an increased risk of developing a particular disease.
-
B.
governsVariant
Indicates a regulatory relationship where one entity controls, influences, or determines the behavior or state of a specific variant of another entity.
-
C.
protectiveAlleleForDisease
Indicates that the presence of a specific allele reduces the risk, severity, or likelihood of developing a particular disease.
-
D.
associatedWithPhenotype
chosen
Indicates that an entity has a documented connection or correlation with a particular phenotype or observable trait.
-
E.
hasGeneticLocus
Indicates that a genetic feature or trait is located at, or associated with, a specific position (locus) on a genome or chromosome.
- F. None of above.
Provenance (3 batches)
The batch behind each pipeline step, in order, with when it ran. Timestamps are batch-level — stages were processed in waves, so the object chain (NER → NED1 → NEDg → NED2) reads in order, but predicate / elicitation batches can sit in a different wave.
| Step | Stage | Batch ID | Status | When |
|---|---|---|---|---|
| creating | Elicitation | batch_69f3497281a08190b4705de0b5f26ba7 |
completed | April 30, 2026, 12:22 p.m. |
| NER | Named-entity recognition | batch_69f6e4cff8c08190aecaabf722cf3891 |
completed | May 3, 2026, 6:01 a.m. |
| PD | Predicate disambiguation | batch_69f6e3da41948190a4cfe866ce184f73 |
completed | May 3, 2026, 5:57 a.m. |
Created at: May 1, 2026, 1:37 a.m.