Triple
T33292312
| Position | Surface form | Disambiguated ID | Type / Status |
|---|---|---|---|
| Subject | VKORC1 |
E852347
|
entity |
| Predicate | polymorphismEffect |
P176460
|
FINISHED |
| Object | alters VKORC1 expression |
—
|
LITERAL FINISHED |
How this triple was built (2 steps)
Every LLM step that produced this triple, in pipeline order — named-entity classification, the disambiguation choices (the exact options shown, with the pick highlighted), and the generated description. The batch + timestamp of each is in the Provenance table below.
NER
Named-entity recognition
gpt-5-mini
Instruction
Given a phrase, classify it is english named entity (e.g., persons, organizations, works of art) in Latin script, or not (e.g., literals, dates, URLs, verbose phrases). For disambiguation, the statement where the phrase occurs as object is also given. Please return a JSON object with `phrase` (string, the phrase being analyzed) and `is_ne` (boolean, indicating whether the phrase is a Named Entity).
Input
Phrase: alters VKORC1 expression | Statement: [VKORC1, polymorphismEffect, alters VKORC1 expression]
PD
Predicate disambiguation
gpt-5-mini-2025-08-07
Target predicate: polymorphismEffect Context triple: [VKORC1, polymorphismEffect, alters VKORC1 expression]
-
A.
polymorphic
Indicates that an entity can take on multiple distinct forms or types while maintaining a common interface or role in a relationship or action.
-
B.
protectiveAlleleForDisease
Indicates that the presence of a specific allele reduces the risk, severity, or likelihood of developing a particular disease.
-
C.
workerPolymorphism
Indicates that an entity functions as a worker in multiple forms or roles, varying its behavior or type depending on context.
-
D.
affectsChromosome
Indicates a relationship where one entity produces a change or impact on the structure, function, or integrity of a chromosome.
-
E.
clinicalSignificanceOfVariants
Indicates the assessed clinical importance or impact that specific genetic variants have in a medical or diagnostic context.
- F. None of above. chosen
Provenance (4 batches)
The batch behind each pipeline step, in order, with when it ran. Timestamps are batch-level — stages were processed in waves, so the object chain (NER → NED1 → NEDg → NED2) reads in order, but predicate / elicitation batches can sit in a different wave.
| Step | Stage | Batch ID | Status | When |
|---|---|---|---|---|
| creating | Elicitation | batch_69f349660ff48190a4568803d0b89941 |
completed | April 30, 2026, 12:21 p.m. |
| NER | Named-entity recognition | batch_69f6e3156ea48190b604e414665ef351 |
completed | May 3, 2026, 5:54 a.m. |
| PD | Predicate disambiguation | batch_69f6de0b9ba48190887c9eb5d06a2e94 |
completed | May 3, 2026, 5:32 a.m. |
| PDg | Predicate description generation | batch_69f6e312d7fc819094dec41810f2585d |
completed | May 3, 2026, 5:54 a.m. |
Created at: May 1, 2026, 1:33 a.m.