Triple

T2800020
Position Surface form Disambiguated ID Type / Status
Subject Shinya Yamanaka E53130 entity
Predicate notableConcept P201 FINISHED
Object Yamanaka factors Oct3/4, Sox2, Klf4, and c-Myc
Yamanaka factors Oct3/4, Sox2, Klf4, and c-Myc are a set of transcription factors whose forced expression can reprogram differentiated somatic cells into induced pluripotent stem cells.
E299919 NE FINISHED

How this triple was built (4 steps)

Every LLM step that produced this triple, in pipeline order — named-entity classification, the disambiguation choices (the exact options shown, with the pick highlighted), and the generated description. The batch + timestamp of each is in the Provenance table below.

NER Named-entity recognition gpt-5-mini
Instruction
Given a phrase, classify it is english named entity (e.g., persons, organizations, works of art) in Latin script, or not (e.g., literals, dates, URLs, verbose phrases). For disambiguation, the statement where the phrase occurs as object is also given. Please return a JSON object with `phrase` (string, the phrase being analyzed) and `is_ne` (boolean, indicating whether the phrase is a Named Entity).
Input
Phrase: Yamanaka factors Oct3/4, Sox2, Klf4, and c-Myc | Statement: [Shinya Yamanaka, notableConcept, Yamanaka factors Oct3/4, Sox2, Klf4, and c-Myc]
NED1 Entity disambiguation (via context triple) gpt-5-mini-2025-08-07
Target entity: Yamanaka factors Oct3/4, Sox2, Klf4, and c-Myc
Context triple: [Shinya Yamanaka, notableConcept, Yamanaka factors Oct3/4, Sox2, Klf4, and c-Myc]
  • A. Cologne Excellence Cluster on Cellular Stress Responses in Aging-Associated Diseases
    The Cologne Excellence Cluster on Cellular Stress Responses in Aging-Associated Diseases is a research consortium focused on understanding how cellular stress mechanisms contribute to aging and age-related diseases to develop new therapeutic strategies.
  • B. Center for Cellular and Molecular Therapeutics
    The Center for Cellular and Molecular Therapeutics is a research institute specializing in developing gene and cell-based therapies for pediatric and genetic diseases.
  • C. Szostak Design
    Szostak Design is an architectural firm known for designing prominent cultural and performing arts venues, including the Durham Performing Arts Center in North Carolina.
  • D. The Language of Life
    The Language of Life is a popular science book by geneticist Francis Collins that explains how advances in genomics are transforming medicine and personal health.
  • E. The Cell
    The Cell is a nickname for the Chicago White Sox’s home ballpark, officially known for much of its history as U.S. Cellular Field.
  • F. None of above. chosen
  • G. Unsure - the case is ambiguous/there is not enough information to decide.
NEDg Description generation gpt-5.1
Instruction
Generate a one-sentence description of the target entity. 
You are given a context triple in the form (subject, predicate, object), where the object is the target entity. 
# Instructions
Use the triple to infer relevant information about the entity. Describe the entity based on what is most defining, well-known. 
Avoid repeating the information from the triple, unless really essential.
# Response Format
Return only the sentence: "Description: [one-sentence description of the target entity]"
Input
Entity: Yamanaka factors Oct3/4, Sox2, Klf4, and c-Myc
Triple: [Shinya Yamanaka, notableConcept, Yamanaka factors Oct3/4, Sox2, Klf4, and c-Myc]
Generated description
Yamanaka factors Oct3/4, Sox2, Klf4, and c-Myc are a set of transcription factors whose forced expression can reprogram differentiated somatic cells into induced pluripotent stem cells.
NED2 Entity disambiguation (via description) gpt-5-mini-2025-08-07
Target entity: Yamanaka factors Oct3/4, Sox2, Klf4, and c-Myc
Target entity description: Yamanaka factors Oct3/4, Sox2, Klf4, and c-Myc are a set of transcription factors whose forced expression can reprogram differentiated somatic cells into induced pluripotent stem cells.
  • A. Cologne Excellence Cluster on Cellular Stress Responses in Aging-Associated Diseases
    The Cologne Excellence Cluster on Cellular Stress Responses in Aging-Associated Diseases is a research consortium focused on understanding how cellular stress mechanisms contribute to aging and age-related diseases to develop new therapeutic strategies.
  • B. Center for Cellular and Molecular Therapeutics
    The Center for Cellular and Molecular Therapeutics is a research institute specializing in developing gene and cell-based therapies for pediatric and genetic diseases.
  • C. Szostak Design
    Szostak Design is an architectural firm known for designing prominent cultural and performing arts venues, including the Durham Performing Arts Center in North Carolina.
  • D. The Language of Life
    The Language of Life is a popular science book by geneticist Francis Collins that explains how advances in genomics are transforming medicine and personal health.
  • E. The Cell
    The Cell is a nickname for the Chicago White Sox’s home ballpark, officially known for much of its history as U.S. Cellular Field.
  • F. None of above. chosen

Provenance (5 batches)

The batch behind each pipeline step, in order, with when it ran. Timestamps are batch-level — stages were processed in waves, so the object chain (NER → NED1 → NEDg → NED2) reads in order, but predicate / elicitation batches can sit in a different wave.

Step Stage Batch ID Status When
creating Elicitation batch_69ab495a90788190941b6917e1eca3a6 completed March 6, 2026, 9:38 p.m.
NER Named-entity recognition batch_69abddf4ca9c8190a4adfd1c1373af41 completed March 7, 2026, 8:12 a.m.
NED1 Entity disambiguation (via context triple) batch_69afc66ad9cc81908af6d3816a840c75 completed March 10, 2026, 7:21 a.m.
NEDg Description generation batch_69afc80ba2148190ae0c1f6425d52dfd completed March 10, 2026, 7:28 a.m.
NED2 Entity disambiguation (via description) batch_69afc97fc45481908aa72ac8607c34ac completed March 10, 2026, 7:34 a.m.
Created at: March 6, 2026, 9:58 p.m.