Triple

T2504156
Position Surface form Disambiguated ID Type / Status
Subject Mycobacterium tuberculosis E52537 entity
Predicate relatedDiseaseComplex P40201 FINISHED
Object Mycobacterium tuberculosis complex
Mycobacterium tuberculosis complex is a group of closely related mycobacterial species that cause tuberculosis in humans and various animals.
E271799 NE FINISHED

How this triple was built (5 steps)

Every LLM step that produced this triple, in pipeline order — named-entity classification, the disambiguation choices (the exact options shown, with the pick highlighted), and the generated description. The batch + timestamp of each is in the Provenance table below.

NER Named-entity recognition gpt-5-mini
Instruction
Given a phrase, classify it is english named entity (e.g., persons, organizations, works of art) in Latin script, or not (e.g., literals, dates, URLs, verbose phrases). For disambiguation, the statement where the phrase occurs as object is also given. Please return a JSON object with `phrase` (string, the phrase being analyzed) and `is_ne` (boolean, indicating whether the phrase is a Named Entity).
Input
Phrase: Mycobacterium tuberculosis complex | Statement: [Mycobacterium tuberculosis, relatedDiseaseComplex, Mycobacterium tuberculosis complex]
NED1 Entity disambiguation (via context triple) gpt-5-mini-2025-08-07
Target entity: Mycobacterium tuberculosis complex
Context triple: [Mycobacterium tuberculosis, relatedDiseaseComplex, Mycobacterium tuberculosis complex]
  • A. Mycobacterium tuberculosis
    Mycobacterium tuberculosis is the pathogenic bacterial species that causes most cases of human tuberculosis, primarily affecting the lungs and spreading through airborne transmission.
  • B. Bacillus anthracis
    Bacillus anthracis is a Gram-positive, spore-forming bacterium that causes the disease anthrax in humans and animals.
  • C. Yersinia pestis
    Yersinia pestis is a highly virulent bacterium responsible for plague, including the historic pandemics of bubonic, septicemic, and pneumonic forms.
  • D. Vibrio cholerae
    Vibrio cholerae is a Gram-negative, comma-shaped bacterium that causes the acute diarrheal disease cholera in humans.
  • E. BCG vaccine
    The BCG vaccine is a widely used immunization that primarily protects against severe forms of tuberculosis, especially in young children.
  • F. None of above. chosen
  • G. Unsure - the case is ambiguous/there is not enough information to decide.
NEDg Description generation gpt-5.1
Instruction
Generate a one-sentence description of the target entity. 
You are given a context triple in the form (subject, predicate, object), where the object is the target entity. 
# Instructions
Use the triple to infer relevant information about the entity. Describe the entity based on what is most defining, well-known. 
Avoid repeating the information from the triple, unless really essential.
# Response Format
Return only the sentence: "Description: [one-sentence description of the target entity]"
Input
Entity: Mycobacterium tuberculosis complex
Triple: [Mycobacterium tuberculosis, relatedDiseaseComplex, Mycobacterium tuberculosis complex]
Generated description
Mycobacterium tuberculosis complex is a group of closely related mycobacterial species that cause tuberculosis in humans and various animals.
NED2 Entity disambiguation (via description) gpt-5-mini-2025-08-07
Target entity: Mycobacterium tuberculosis complex
Target entity description: Mycobacterium tuberculosis complex is a group of closely related mycobacterial species that cause tuberculosis in humans and various animals.
  • A. Mycobacterium tuberculosis
    Mycobacterium tuberculosis is the pathogenic bacterial species that causes most cases of human tuberculosis, primarily affecting the lungs and spreading through airborne transmission.
  • B. Bacillus anthracis
    Bacillus anthracis is a Gram-positive, spore-forming bacterium that causes the disease anthrax in humans and animals.
  • C. Yersinia pestis
    Yersinia pestis is a highly virulent bacterium responsible for plague, including the historic pandemics of bubonic, septicemic, and pneumonic forms.
  • D. Vibrio cholerae
    Vibrio cholerae is a Gram-negative, comma-shaped bacterium that causes the acute diarrheal disease cholera in humans.
  • E. BCG vaccine
    The BCG vaccine is a widely used immunization that primarily protects against severe forms of tuberculosis, especially in young children.
  • F. None of above. chosen
PD Predicate disambiguation gpt-5-mini-2025-08-07
Target predicate: relatedDiseaseComplex
Context triple: [Mycobacterium tuberculosis, relatedDiseaseComplex, Mycobacterium tuberculosis complex]
  • A. mayBeComorbidWith
    Indicates that two conditions or disorders can occur together in the same individual, potentially influencing each other’s presence or severity.
  • B. diseaseType
    Indicates that one entity is classified as a specific type or category of disease in relation to another entity.
  • C. hasTargetDisease
    Indicates that an entity (such as a treatment, study, or intervention) is directed toward, intended to affect, or primarily concerned with a specified disease.
  • D. featuresDisease
    Indicates that an entity exhibits, presents, or is characterized by a particular disease.
  • E. relatedSpeciesOrVariant
    Indicates that one species or biological variant is taxonomically or genetically related to another.
  • F. None of above. chosen

Provenance (7 batches)

The batch behind each pipeline step, in order, with when it ran. Timestamps are batch-level — stages were processed in waves, so the object chain (NER → NED1 → NEDg → NED2) reads in order, but predicate / elicitation batches can sit in a different wave.

Step Stage Batch ID Status When
creating Elicitation batch_69ab4957b3a88190adf968ae0c1b931c completed March 6, 2026, 9:38 p.m.
NER Named-entity recognition batch_69abd1cd2db0819087d21ec49ffd9585 completed March 7, 2026, 7:20 a.m.
NED1 Entity disambiguation (via context triple) batch_69af1fa57aa4819096578a5538973ec4 completed March 9, 2026, 7:29 p.m.
NEDg Description generation batch_69af203f7ca08190ba781891bd879192 completed March 9, 2026, 7:32 p.m.
NED2 Entity disambiguation (via description) batch_69af20cd13a88190a35bc1b74ad088ef completed March 9, 2026, 7:34 p.m.
PD Predicate disambiguation batch_69abd0bba5348190bb4637d3165cb339 completed March 7, 2026, 7:16 a.m.
PDg Predicate description generation batch_69abd1aa13a08190a8757c017d8a2478 completed March 7, 2026, 7:20 a.m.
Created at: March 6, 2026, 9:46 p.m.