Triple
T23466852
| Position | Surface form | Disambiguated ID | Type / Status |
|---|---|---|---|
| Subject | GEO DataSets |
E569121
|
entity |
| Predicate | instanceOf |
P0
|
FINISHED |
| Object | gene expression database |
C24488
|
CONCEPT FINISHED |
How this triple was built (1 step)
Every LLM step that produced this triple, in pipeline order — named-entity classification, the disambiguation choices (the exact options shown, with the pick highlighted), and the generated description. The batch + timestamp of each is in the Provenance table below.
CD
Concept disambiguation
gpt-5-mini-2025-08-07
Target class: gene expression database Context triple: [GEO DataSets, instanceOf, gene expression database]
-
A.
biological database
chosen
A biological database is an organized, searchable repository that stores, manages, and provides access to biological information such as sequences, structures, functions, and interactions of biomolecules and organisms.
-
B.
gene
A gene is a segment of DNA that contains the information needed to produce a functional product, typically a protein or functional RNA, and thereby influences an organism’s traits and biological processes.
-
C.
functional genomics initiative
A functional genomics initiative is a coordinated research effort that systematically investigates how genes and their regulatory elements contribute to biological functions, traits, and diseases, often using high-throughput experimental and computational approaches.
-
D.
genome
A genome is the complete set of genetic material, including all of an organism's genes and non-coding sequences, encoded in its DNA (or RNA in some viruses).
-
E.
biological database search system
A biological database search system is a software tool that enables users to efficiently query, retrieve, and analyze biological data (such as sequences, structures, and annotations) from one or more integrated databases.
- F. None of above.
Provenance (1 batch)
The batch behind each pipeline step, in order, with when it ran. Timestamps are batch-level — stages were processed in waves, so the object chain (NER → NED1 → NEDg → NED2) reads in order, but predicate / elicitation batches can sit in a different wave.
| Step | Stage | Batch ID | Status | When |
|---|---|---|---|---|
| creating | Elicitation | batch_69e2458ebd808190b3298163132cfb0b |
completed | April 17, 2026, 2:37 p.m. |
Created at: April 17, 2026, 5:54 p.m.