Triple

T22693451
Position Surface form Disambiguated ID Type / Status
Subject TAF15 E561107 entity
Predicate formsFusionWith P149326 FINISHED
Object NR4A3 NE NERFINISHED

How this triple was built (4 steps)

Every LLM step that produced this triple, in pipeline order — named-entity classification, the disambiguation choices (the exact options shown, with the pick highlighted), and the generated description. The batch + timestamp of each is in the Provenance table below.

NER Named-entity recognition gpt-5-mini
Instruction
Given a phrase, classify it is english named entity (e.g., persons, organizations, works of art) in Latin script, or not (e.g., literals, dates, URLs, verbose phrases). For disambiguation, the statement where the phrase occurs as object is also given. Please return a JSON object with `phrase` (string, the phrase being analyzed) and `is_ne` (boolean, indicating whether the phrase is a Named Entity).
Input
Phrase: NR4A3 | Statement: [TAF15, formsFusionWith, NR4A3]
NED1 Entity disambiguation (via context triple) gpt-5-mini-2025-08-07
Target entity: NR4A3
Context triple: [TAF15, formsFusionWith, NR4A3]
  • A. NEUROD1 transcription factor
    NEUROD1 transcription factor is a basic helix-loop-helix (bHLH) transcription factor crucial for neuronal differentiation and pancreatic beta-cell development, where it helps control insulin gene expression.
  • B. Oct3/4
    Oct3/4 (also known as POU5F1) is a key transcription factor that maintains pluripotency and self-renewal in embryonic stem cells and is widely used in cellular reprogramming.
  • C. Sox2
    Sox2 is a key transcription factor that maintains stem cell pluripotency and self-renewal and is widely used in cellular reprogramming.
  • D. TARDBP
    TARDBP is a gene encoding the TDP-43 protein, a DNA/RNA-binding protein whose abnormal aggregation is a key pathological feature in amyotrophic lateral sclerosis and related neurodegenerative diseases.
  • E. GRIN3B
    GRIN3B is a human gene that encodes the GluN3B subunit of NMDA-type glutamate receptors involved in excitatory neurotransmission and synaptic plasticity in the central nervous system.
  • F. None of above. chosen
  • G. Unsure - the case is ambiguous/there is not enough information to decide.
NED2 Entity disambiguation (via description) gpt-5-mini-2025-08-07
Target entity: NR4A3
Target entity description: NR4A3 is a nuclear receptor transcription factor involved in regulating gene expression linked to cell growth, differentiation, and oncogenic fusion events in certain cancers.
  • A. NEUROD1 transcription factor
    NEUROD1 transcription factor is a basic helix-loop-helix (bHLH) transcription factor crucial for neuronal differentiation and pancreatic beta-cell development, where it helps control insulin gene expression.
  • B. Oct3/4
    Oct3/4 (also known as POU5F1) is a key transcription factor that maintains pluripotency and self-renewal in embryonic stem cells and is widely used in cellular reprogramming.
  • C. Sox2
    Sox2 is a key transcription factor that maintains stem cell pluripotency and self-renewal and is widely used in cellular reprogramming.
  • D. TARDBP
    TARDBP is a gene encoding the TDP-43 protein, a DNA/RNA-binding protein whose abnormal aggregation is a key pathological feature in amyotrophic lateral sclerosis and related neurodegenerative diseases.
  • E. GRIN3B
    GRIN3B is a human gene that encodes the GluN3B subunit of NMDA-type glutamate receptors involved in excitatory neurotransmission and synaptic plasticity in the central nervous system.
  • F. None of above. chosen
PD Predicate disambiguation gpt-5-mini-2025-08-07
Target predicate: formsFusionWith
Context triple: [TAF15, formsFusionWith, NR4A3]
  • A. formsWith
    Indicates that one entity combines or associates with another to create or constitute a joint structure, group, or configuration.
  • B. formsFlocksWith
    Indicates that entities regularly gather and move together in coordinated groups or flocks.
  • C. formsFrom
    Indicates that one entity is created, derived, or takes shape as a result of another entity.
  • D. formsFor
    Indicates that one entity constitutes the physical or structural makeup of another entity.
  • E. formsIn
    Indicates that one entity takes shape, develops, or comes into existence within or inside another entity.
  • F. None of above. chosen

Provenance (4 batches)

The batch behind each pipeline step, in order, with when it ran. Timestamps are batch-level — stages were processed in waves, so the object chain (NER → NED1 → NEDg → NED2) reads in order, but predicate / elicitation batches can sit in a different wave.

Step Stage Batch ID Status When
creating Elicitation batch_69e2454d71b48190a1f80af9f82b6fcf completed April 17, 2026, 2:35 p.m.
NER Named-entity recognition batch_69f1789c6ae481908975b7d27e7624ac completed April 29, 2026, 3:18 a.m.
PD Predicate disambiguation batch_69ee62b2259c819091ed1387a748b9f3 completed April 26, 2026, 7:08 p.m.
PDg Predicate description generation batch_69ee8843d3308190b6e22bb98ae5c3d8 completed April 26, 2026, 9:48 p.m.
Created at: April 17, 2026, 3:13 p.m.