Triple
T22692716
| Position | Surface form | Disambiguated ID | Type / Status |
|---|---|---|---|
| Subject | LSm proteins |
E561091
|
entity |
| Predicate | sharesHomologyWith |
P77977
|
FINISHED |
| Object | canonical Sm proteins |
—
|
LITERAL FINISHED |
How this triple was built (2 steps)
Every LLM step that produced this triple, in pipeline order — named-entity classification, the disambiguation choices (the exact options shown, with the pick highlighted), and the generated description. The batch + timestamp of each is in the Provenance table below.
NER
Named-entity recognition
gpt-5-mini
Instruction
Given a phrase, classify it is english named entity (e.g., persons, organizations, works of art) in Latin script, or not (e.g., literals, dates, URLs, verbose phrases). For disambiguation, the statement where the phrase occurs as object is also given. Please return a JSON object with `phrase` (string, the phrase being analyzed) and `is_ne` (boolean, indicating whether the phrase is a Named Entity).
Input
Phrase: canonical Sm proteins | Statement: [LSm proteins, sharesHomologyWith, canonical Sm proteins]
PD
Predicate disambiguation
gpt-5-mini-2025-08-07
Target predicate: sharesHomologyWith Context triple: [LSm proteins, sharesHomologyWith, canonical Sm proteins]
-
A.
homologousTo
chosen
Indicates that two entities share a common evolutionary origin or structural similarity, often implying they derive from the same ancestral feature.
-
B.
hasOrthologsWith
Indicates that two genes or proteins in different species are orthologous, meaning they originated from a common ancestral gene and typically retain similar functions.
-
C.
sharesAlignmentWith
Indicates that two entities have the same or sufficiently similar alignment, orientation, or stance according to a defined alignment system.
-
D.
paralogOf
Indicates that two genes or proteins are evolutionarily related as paralogs, having arisen from a duplication event within the same genome.
-
E.
geneticallyIdenticalTo
Indicates that two entities share the same genetic makeup, with no differences in their DNA sequence.
- F. None of above.
Provenance (3 batches)
The batch behind each pipeline step, in order, with when it ran. Timestamps are batch-level — stages were processed in waves, so the object chain (NER → NED1 → NEDg → NED2) reads in order, but predicate / elicitation batches can sit in a different wave.
| Step | Stage | Batch ID | Status | When |
|---|---|---|---|---|
| creating | Elicitation | batch_69e2454d71b48190a1f80af9f82b6fcf |
completed | April 17, 2026, 2:35 p.m. |
| NER | Named-entity recognition | batch_69f1789ba0148190891781d05ec64f3c |
completed | April 29, 2026, 3:18 a.m. |
| PD | Predicate disambiguation | batch_69ee62b2259c819091ed1387a748b9f3 |
completed | April 26, 2026, 7:08 p.m. |
Created at: April 17, 2026, 3:13 p.m.