Triple
T22516232
| Position | Surface form | Disambiguated ID | Type / Status |
|---|---|---|---|
| Subject | Cdc28 |
E556655
|
entity |
| Predicate | encodedBy |
P14248
|
FINISHED |
| Object | CDC28 gene |
—
|
NE NERFINISHED |
How this triple was built (2 steps)
Every LLM step that produced this triple, in pipeline order — named-entity classification, the disambiguation choices (the exact options shown, with the pick highlighted), and the generated description. The batch + timestamp of each is in the Provenance table below.
NER
Named-entity recognition
gpt-5-mini
Instruction
Given a phrase, classify it is english named entity (e.g., persons, organizations, works of art) in Latin script, or not (e.g., literals, dates, URLs, verbose phrases). For disambiguation, the statement where the phrase occurs as object is also given. Please return a JSON object with `phrase` (string, the phrase being analyzed) and `is_ne` (boolean, indicating whether the phrase is a Named Entity).
Input
Phrase: CDC28 gene | Statement: [Cdc28, encodedBy, CDC28 gene]
NED1
Entity disambiguation (via context triple)
gpt-5-mini-2025-08-07
Target entity: CDC28 gene Context triple: [Cdc28, encodedBy, CDC28 gene]
-
A.
Cdc28
chosen
Cdc28 is the major cyclin-dependent kinase in budding yeast that drives progression through the cell cycle by phosphorylating key regulatory proteins.
-
B.
CDK4
CDK4 is a cyclin-dependent kinase that regulates cell cycle progression and is a key therapeutic target in certain cancers.
-
C.
CDK6
CDK6 is a cyclin-dependent kinase that regulates cell cycle progression and is a key target in certain cancer therapies.
-
D.
c-Myc
c-Myc is a proto-oncogene transcription factor that regulates cell growth, proliferation, and metabolism and is frequently dysregulated in cancer.
-
E.
Knudson
Knudson is a surname of Scandinavian origin that serves as a variant spelling of Knudsen.
- F. None of above.
- G. Unsure - the case is ambiguous/there is not enough information to decide.
Provenance (2 batches)
The batch behind each pipeline step, in order, with when it ran. Timestamps are batch-level — stages were processed in waves, so the object chain (NER → NED1 → NEDg → NED2) reads in order, but predicate / elicitation batches can sit in a different wave.
| Step | Stage | Batch ID | Status | When |
|---|---|---|---|---|
| creating | Elicitation | batch_69e11e5657e881909f16ca58352c50da |
completed | April 16, 2026, 5:37 p.m. |
| NER | Named-entity recognition | batch_69f15e2cfc908190b3489228a1997f45 |
completed | April 29, 2026, 1:26 a.m. |
Created at: April 16, 2026, 8:50 p.m.