Triple
T19992624
| Position | Surface form | Disambiguated ID | Type / Status |
|---|---|---|---|
| Subject | APOE gene |
E494100
|
entity |
| Predicate | mostCommonAllele |
P97012
|
FINISHED |
| Object | APOE ε3 |
—
|
NE NERFINISHED |
How this triple was built (3 steps)
Every LLM step that produced this triple, in pipeline order — named-entity classification, the disambiguation choices (the exact options shown, with the pick highlighted), and the generated description. The batch + timestamp of each is in the Provenance table below.
NER
Named-entity recognition
gpt-5-mini
Instruction
Given a phrase, classify it is english named entity (e.g., persons, organizations, works of art) in Latin script, or not (e.g., literals, dates, URLs, verbose phrases). For disambiguation, the statement where the phrase occurs as object is also given. Please return a JSON object with `phrase` (string, the phrase being analyzed) and `is_ne` (boolean, indicating whether the phrase is a Named Entity).
Input
Phrase: APOE ε3 | Statement: [APOE gene, mostCommonAllele, APOE ε3]
NED1
Entity disambiguation (via context triple)
gpt-5-mini-2025-08-07
Target entity: APOE ε3 Context triple: [APOE gene, mostCommonAllele, APOE ε3]
-
A.
APOE ε3 allele
chosen
The APOE ε3 allele is the most common and generally considered the “neutral” variant of the apolipoprotein E gene, associated with average risk for Alzheimer’s disease and typical lipid metabolism compared to other APOE alleles.
-
B.
APOE ε2
APOE ε2 is a common apolipoprotein E gene variant associated with a reduced risk of late-onset Alzheimer’s disease but an increased risk of type III hyperlipoproteinemia.
-
C.
APOE ε4 allele
The APOE ε4 allele is a genetic variant of the apolipoprotein E gene that significantly increases an individual's susceptibility to late-onset Alzheimer's disease.
-
D.
APOE gene
The APOE gene encodes apolipoprotein E, a key protein in lipid metabolism whose variants, especially ε4, strongly influence risk for Alzheimer’s disease and cardiovascular disorders.
-
E.
Friedewald
Friedewald is a small German locality historically associated with the nobility of Thuringia and Hesse.
- F. None of above.
- G. Unsure - the case is ambiguous/there is not enough information to decide.
PD
Predicate disambiguation
gpt-5-mini-2025-08-07
Target predicate: mostCommonAllele Context triple: [APOE gene, mostCommonAllele, APOE ε3]
-
A.
mostCommonVersion
chosen
Indicates that the referenced version is the one that occurs or is used more frequently than any other version within a given set or context.
-
B.
moreCommonAs
Indicates that one thing occurs or is observed more frequently in a specified role, form, or context than in another.
-
C.
moreCommonIn
Indicates that something occurs with greater frequency or prevalence in one group, context, or location than in another.
-
D.
dominantGeneration
Indicates that one generation in a life cycle is more prominent, long-lived, or visually conspicuous than the other generation(s).
-
E.
dominantFormOf
Indicates that one form of something is the primary, prevailing, or most influential version relative to another form.
- F. None of above.
Provenance (3 batches)
The batch behind each pipeline step, in order, with when it ran. Timestamps are batch-level — stages were processed in waves, so the object chain (NER → NED1 → NEDg → NED2) reads in order, but predicate / elicitation batches can sit in a different wave.
| Step | Stage | Batch ID | Status | When |
|---|---|---|---|---|
| creating | Elicitation | batch_69da626a67648190af9653832a3aeced |
completed | April 11, 2026, 3:02 p.m. |
| NER | Named-entity recognition | batch_69e65fe10ffc81908c94168b0a8ea9c9 |
completed | April 20, 2026, 5:18 p.m. |
| PD | Predicate disambiguation | batch_69e537fd311881908448f2aea8b4812e |
completed | April 19, 2026, 8:15 p.m. |
Created at: April 11, 2026, 3:31 p.m.