Triple
T15313579
| Position | Surface form | Disambiguated ID | Type / Status |
|---|---|---|---|
| Subject | CRISPR-Cas9 gene-editing technology |
E366097
|
entity |
| Predicate | hasVariant |
P455
|
FINISHED |
| Object |
SpCas9
SpCas9 is a widely used CRISPR-associated nuclease from Streptococcus pyogenes that enables precise, programmable genome editing in many organisms.
|
E366097
|
NE FINISHED |
How this triple was built (4 steps)
Every LLM step that produced this triple, in pipeline order — named-entity classification, the disambiguation choices (the exact options shown, with the pick highlighted), and the generated description. The batch + timestamp of each is in the Provenance table below.
NER
Named-entity recognition
gpt-5-mini
Instruction
Given a phrase, classify it is english named entity (e.g., persons, organizations, works of art) in Latin script, or not (e.g., literals, dates, URLs, verbose phrases). For disambiguation, the statement where the phrase occurs as object is also given. Please return a JSON object with `phrase` (string, the phrase being analyzed) and `is_ne` (boolean, indicating whether the phrase is a Named Entity).
Input
Phrase: SpCas9 | Statement: [CRISPR-Cas9 gene-editing technology, hasVariant, SpCas9]
NED1
Entity disambiguation (via context triple)
gpt-5-mini-2025-08-07
Target entity: SpCas9 Context triple: [CRISPR-Cas9 gene-editing technology, hasVariant, SpCas9]
-
A.
CASP13
CASP13 is the 13th Critical Assessment of protein Structure Prediction experiment, an international community-wide competition that benchmarks computational methods for predicting 3D protein structures.
-
B.
CRISPR-Cas9 gene-editing technology
CRISPR-Cas9 gene-editing technology is a revolutionary molecular tool that allows scientists to precisely modify DNA within living organisms, transforming research, medicine, and biotechnology.
-
C.
CASP14
CASP14 is the fourteenth edition of the Critical Assessment of protein Structure Prediction experiment, a community-wide benchmark for evaluating computational methods in protein structure modeling.
-
D.
phiC31 integrase system
The phiC31 integrase system is a site-specific recombination tool widely used in genetic engineering to insert DNA precisely into defined genomic locations.
-
E.
Visium
Visium is a processor architecture supported by the GNU Assembler within the GNU Binutils toolchain.
- F. None of above. chosen
- G. Unsure - the case is ambiguous/there is not enough information to decide.
NEDg
Description generation
gpt-5.1
Instruction
Generate a one-sentence description of the target entity. You are given a context triple in the form (subject, predicate, object), where the object is the target entity. # Instructions Use the triple to infer relevant information about the entity. Describe the entity based on what is most defining, well-known. Avoid repeating the information from the triple, unless really essential. # Response Format Return only the sentence: "Description: [one-sentence description of the target entity]"
Input
Entity: SpCas9 Triple: [CRISPR-Cas9 gene-editing technology, hasVariant, SpCas9]
Generated description
SpCas9 is a widely used CRISPR-associated nuclease from Streptococcus pyogenes that enables precise, programmable genome editing in many organisms.
NED2
Entity disambiguation (via description)
gpt-5-mini-2025-08-07
Target entity: SpCas9 Target entity description: SpCas9 is a widely used CRISPR-associated nuclease from Streptococcus pyogenes that enables precise, programmable genome editing in many organisms.
-
A.
CASP13
CASP13 is the 13th Critical Assessment of protein Structure Prediction experiment, an international community-wide competition that benchmarks computational methods for predicting 3D protein structures.
-
B.
CRISPR-Cas9 gene-editing technology
chosen
CRISPR-Cas9 gene-editing technology is a revolutionary molecular tool that allows scientists to precisely modify DNA within living organisms, transforming research, medicine, and biotechnology.
-
C.
CASP14
CASP14 is the fourteenth edition of the Critical Assessment of protein Structure Prediction experiment, a community-wide benchmark for evaluating computational methods in protein structure modeling.
-
D.
phiC31 integrase system
The phiC31 integrase system is a site-specific recombination tool widely used in genetic engineering to insert DNA precisely into defined genomic locations.
-
E.
Visium
Visium is a processor architecture supported by the GNU Assembler within the GNU Binutils toolchain.
- F. None of above.
Provenance (5 batches)
The batch behind each pipeline step, in order, with when it ran. Timestamps are batch-level — stages were processed in waves, so the object chain (NER → NED1 → NEDg → NED2) reads in order, but predicate / elicitation batches can sit in a different wave.
| Step | Stage | Batch ID | Status | When |
|---|---|---|---|---|
| creating | Elicitation | batch_69d85a113ee881908e297a1d38dd79fa |
completed | April 10, 2026, 2:01 a.m. |
| NER | Named-entity recognition | batch_69e03dd050108190a584543cb93943a4 |
completed | April 16, 2026, 1:39 a.m. |
| NED1 | Entity disambiguation (via context triple) | batch_69fef8a3da3881909b50cfbec0543adc |
completed | May 9, 2026, 9:04 a.m. |
| NEDg | Description generation | batch_69fefdb82b2081908084a12a58ad3477 |
completed | May 9, 2026, 9:26 a.m. |
| NED2 | Entity disambiguation (via description) | batch_69fefe6c42708190bd893885fc5bc88e |
completed | May 9, 2026, 9:29 a.m. |
Created at: April 10, 2026, 3:16 a.m.