Triple

T11607689
Position Surface form Disambiguated ID Type / Status
Subject Bacillaceae E275303 entity
Predicate beneficialGenusExample P100572 FINISHED
Object Bacillus subtilis E928065 NE FINISHED

How this triple was built (3 steps)

Every LLM step that produced this triple, in pipeline order — named-entity classification, the disambiguation choices (the exact options shown, with the pick highlighted), and the generated description. The batch + timestamp of each is in the Provenance table below.

NER Named-entity recognition gpt-5-mini
Instruction
Given a phrase, classify it is english named entity (e.g., persons, organizations, works of art) in Latin script, or not (e.g., literals, dates, URLs, verbose phrases). For disambiguation, the statement where the phrase occurs as object is also given. Please return a JSON object with `phrase` (string, the phrase being analyzed) and `is_ne` (boolean, indicating whether the phrase is a Named Entity).
Input
Phrase: Bacillus subtilis | Statement: [Bacillaceae, beneficialGenusExample, Bacillus subtilis]
NED1 Entity disambiguation (via context triple) gpt-5-mini-2025-08-07 
Target entity: Bacillus subtilis
Context triple: [Bacillaceae, beneficialGenusExample, Bacillus subtilis]
  • A. Bacillus subtilis chosen
    Bacillus subtilis is a rod-shaped, Gram-positive, endospore-forming bacterium widely used as a model organism in microbiology and biotechnology.
  • B. Bacillus megaterium
    Bacillus megaterium is a large, rod-shaped, non-pathogenic soil bacterium widely used as a model organism and in industrial biotechnology for enzyme and protein production.
  • C. Bacillus
    Bacillus is a genus of rod-shaped, endospore-forming bacteria that includes both harmless environmental species and notable pathogens such as Bacillus anthracis.
  • D. Paenibacillus
    Paenibacillus is a genus of Gram-positive, endospore-forming bacteria commonly found in soil and known for their roles in nitrogen fixation, plant growth promotion, and biodegradation.
  • E. Streptomyces
    Streptomyces is a genus of filamentous, soil-dwelling bacteria renowned for producing a wide variety of clinically important antibiotics and other bioactive compounds.
  • F. None of above.
  • G. Unsure - the case is ambiguous/there is not enough information to decide.
PD Predicate disambiguation gpt-5-mini-2025-08-07 
Target predicate: beneficialGenusExample
Context triple: [Bacillaceae, beneficialGenusExample, Bacillus subtilis]
  • A. benefice
    Indicates that one entity grants or bestows a benefit, favor, or advantage upon another.
  • B. benefitsCause
    Indicates that one entity gains an advantage, improvement, or positive outcome as a result of another entity or cause.
  • C. notableGenus
    Indicates that one entity is a genus that is especially prominent, well-known, or significant in relation to the other entity.
  • D. pathogenGenus
    Indicates that one entity is a pathogen belonging to, or classified under, the specified genus.
  • E. genusIncludes
    Indicates that a particular genus contains or encompasses the specified subordinate taxonomic entities (such as species or subspecies).
  • F. None of above. chosen

Provenance (5 batches)

The batch behind each pipeline step, in order, with when it ran. Timestamps are batch-level — stages were processed in waves, so the object chain (NER → NED1 → NEDg → NED2) reads in order, but predicate / elicitation batches can sit in a different wave.

Step Stage Batch ID Status When
creating Elicitation batch_69d6aaf84b548190ac072e4fb89ae18f completed April 8, 2026, 7:22 p.m.
NER Named-entity recognition batch_69d89551649c81908096ff392677442d completed April 10, 2026, 6:14 a.m.
NED1 Entity disambiguation (via context triple) batch_69ef8287f2dc819089b14707e035f7a1 completed April 27, 2026, 3:36 p.m.
PD Predicate disambiguation batch_69d85dd20d188190863d1190d4c16048 completed April 10, 2026, 2:17 a.m.
PDg Predicate description generation batch_69d87f2e67108190ac36bf47aac12fa8 completed April 10, 2026, 4:40 a.m.
Created at: April 8, 2026, 9:38 p.m.