Triple
T11074238
| Position | Surface form | Disambiguated ID | Type / Status |
|---|---|---|---|
| Subject | HER2 receptor |
E261824
|
entity |
| Predicate | activatesPathway |
P38196
|
FINISHED |
| Object |
JAK-STAT signaling pathway
The JAK-STAT signaling pathway is a key intracellular cascade that transmits signals from cell-surface receptors to the nucleus to regulate gene expression involved in cell growth, differentiation, immune function, and survival.
|
E902876
|
NE FINISHED |
How this triple was built (4 steps)
Every LLM step that produced this triple, in pipeline order — named-entity classification, the disambiguation choices (the exact options shown, with the pick highlighted), and the generated description. The batch + timestamp of each is in the Provenance table below.
NER
Named-entity recognition
gpt-5-mini
Instruction
Given a phrase, classify it is english named entity (e.g., persons, organizations, works of art) in Latin script, or not (e.g., literals, dates, URLs, verbose phrases). For disambiguation, the statement where the phrase occurs as object is also given. Please return a JSON object with `phrase` (string, the phrase being analyzed) and `is_ne` (boolean, indicating whether the phrase is a Named Entity).
Input
Phrase: JAK-STAT signaling pathway | Statement: [HER2 receptor, activatesPathway, JAK-STAT signaling pathway]
NED1
Entity disambiguation (via context triple)
gpt-5-mini-2025-08-07
Target entity: JAK-STAT signaling pathway Context triple: [HER2 receptor, activatesPathway, JAK-STAT signaling pathway]
-
A.
Toll-like receptor signaling pathway
The Toll-like receptor signaling pathway is a key innate immune signaling cascade that detects pathogen-associated molecular patterns and activates downstream inflammatory and antiviral responses.
-
B.
Bruton tyrosine kinase
Bruton tyrosine kinase is a key signaling enzyme in B cells that plays a crucial role in their development and function and is a major therapeutic target in certain blood cancers and autoimmune diseases.
-
C.
IL-17A
IL-17A is a pro-inflammatory cytokine produced mainly by Th17 cells that plays a key role in the pathogenesis of several autoimmune and inflammatory diseases.
-
D.
IL-64
IL-64 is a major east–west state highway in Illinois that runs from the Mississippi River through the Chicago metropolitan area.
-
E.
PLCγ2
PLCγ2 is a phospholipase C isoform that functions as a key signaling enzyme in immune cells, mediating receptor-induced calcium mobilization and downstream activation pathways.
- F. None of above. chosen
- G. Unsure - the case is ambiguous/there is not enough information to decide.
NEDg
Description generation
gpt-5.1
Instruction
Generate a one-sentence description of the target entity. You are given a context triple in the form (subject, predicate, object), where the object is the target entity. # Instructions Use the triple to infer relevant information about the entity. Describe the entity based on what is most defining, well-known. Avoid repeating the information from the triple, unless really essential. # Response Format Return only the sentence: "Description: [one-sentence description of the target entity]"
Input
Entity: JAK-STAT signaling pathway Triple: [HER2 receptor, activatesPathway, JAK-STAT signaling pathway]
Generated description
The JAK-STAT signaling pathway is a key intracellular cascade that transmits signals from cell-surface receptors to the nucleus to regulate gene expression involved in cell growth, differentiation, immune function, and survival.
NED2
Entity disambiguation (via description)
gpt-5-mini-2025-08-07
Target entity: JAK-STAT signaling pathway Target entity description: The JAK-STAT signaling pathway is a key intracellular cascade that transmits signals from cell-surface receptors to the nucleus to regulate gene expression involved in cell growth, differentiation, immune function, and survival.
-
A.
Toll-like receptor signaling pathway
The Toll-like receptor signaling pathway is a key innate immune signaling cascade that detects pathogen-associated molecular patterns and activates downstream inflammatory and antiviral responses.
-
B.
Bruton tyrosine kinase
Bruton tyrosine kinase is a key signaling enzyme in B cells that plays a crucial role in their development and function and is a major therapeutic target in certain blood cancers and autoimmune diseases.
-
C.
IL-17A
IL-17A is a pro-inflammatory cytokine produced mainly by Th17 cells that plays a key role in the pathogenesis of several autoimmune and inflammatory diseases.
-
D.
IL-64
IL-64 is a major east–west state highway in Illinois that runs from the Mississippi River through the Chicago metropolitan area.
-
E.
PLCγ2
PLCγ2 is a phospholipase C isoform that functions as a key signaling enzyme in immune cells, mediating receptor-induced calcium mobilization and downstream activation pathways.
- F. None of above. chosen
Provenance (5 batches)
The batch behind each pipeline step, in order, with when it ran. Timestamps are batch-level — stages were processed in waves, so the object chain (NER → NED1 → NEDg → NED2) reads in order, but predicate / elicitation batches can sit in a different wave.
| Step | Stage | Batch ID | Status | When |
|---|---|---|---|---|
| creating | Elicitation | batch_69d6aa9983c08190b0ef61603b69feac |
completed | April 8, 2026, 7:20 p.m. |
| NER | Named-entity recognition | batch_69d7994e32fc8190a6591d9e82b68f75 |
completed | April 9, 2026, 12:19 p.m. |
| NED1 | Entity disambiguation (via context triple) | batch_69e3c8cc77988190aad54f56dbd0f8cf |
completed | April 18, 2026, 6:09 p.m. |
| NEDg | Description generation | batch_69e3cefc00148190a1850dc6e31523c3 |
completed | April 18, 2026, 6:35 p.m. |
| NED2 | Entity disambiguation (via description) | batch_69e3d014a644819092c76aa02b573ca9 |
completed | April 18, 2026, 6:40 p.m. |
Created at: April 8, 2026, 9:26 p.m.