Triple
T11074032
| Position | Surface form | Disambiguated ID | Type / Status |
|---|---|---|---|
| Subject | Cepheid |
E261817
|
entity |
| Predicate | developsTestFor |
P20235
|
FINISHED |
| Object |
Clostridioides difficile
Clostridioides difficile is a spore-forming, toxin-producing bacterium that commonly causes antibiotic-associated diarrhea and severe colitis in humans.
|
E902869
|
NE FINISHED |
How this triple was built (4 steps)
Every LLM step that produced this triple, in pipeline order — named-entity classification, the disambiguation choices (the exact options shown, with the pick highlighted), and the generated description. The batch + timestamp of each is in the Provenance table below.
NER
Named-entity recognition
gpt-5-mini
Instruction
Given a phrase, classify it is english named entity (e.g., persons, organizations, works of art) in Latin script, or not (e.g., literals, dates, URLs, verbose phrases). For disambiguation, the statement where the phrase occurs as object is also given. Please return a JSON object with `phrase` (string, the phrase being analyzed) and `is_ne` (boolean, indicating whether the phrase is a Named Entity).
Input
Phrase: Clostridioides difficile | Statement: [Cepheid, developsTestFor, Clostridioides difficile]
NED1
Entity disambiguation (via context triple)
gpt-5-mini-2025-08-07
Target entity: Clostridioides difficile Context triple: [Cepheid, developsTestFor, Clostridioides difficile]
-
A.
Helicobacter
Helicobacter is a genus of spiral-shaped, microaerophilic bacteria best known for species such as H. pylori, which colonize the human stomach and are associated with peptic ulcers and gastric cancer.
-
B.
Escherichia coli
Escherichia coli is a widely studied, rod-shaped bacterium commonly found in the intestines of warm-blooded animals and extensively used as a model organism in microbiology and genetics.
-
C.
Campylobacter
Campylobacter is a genus of bacteria that commonly causes foodborne gastrointestinal infections in humans, often associated with undercooked poultry.
-
D.
Vibrio cholerae
Vibrio cholerae is a Gram-negative, comma-shaped bacterium that causes the acute diarrheal disease cholera in humans.
-
E.
Bacillus anthracis
Bacillus anthracis is a Gram-positive, spore-forming bacterium that causes the disease anthrax in humans and animals.
- F. None of above. chosen
- G. Unsure - the case is ambiguous/there is not enough information to decide.
NEDg
Description generation
gpt-5.1
Instruction
Generate a one-sentence description of the target entity. You are given a context triple in the form (subject, predicate, object), where the object is the target entity. # Instructions Use the triple to infer relevant information about the entity. Describe the entity based on what is most defining, well-known. Avoid repeating the information from the triple, unless really essential. # Response Format Return only the sentence: "Description: [one-sentence description of the target entity]"
Input
Entity: Clostridioides difficile Triple: [Cepheid, developsTestFor, Clostridioides difficile]
Generated description
Clostridioides difficile is a spore-forming, toxin-producing bacterium that commonly causes antibiotic-associated diarrhea and severe colitis in humans.
NED2
Entity disambiguation (via description)
gpt-5-mini-2025-08-07
Target entity: Clostridioides difficile Target entity description: Clostridioides difficile is a spore-forming, toxin-producing bacterium that commonly causes antibiotic-associated diarrhea and severe colitis in humans.
-
A.
Helicobacter
Helicobacter is a genus of spiral-shaped, microaerophilic bacteria best known for species such as H. pylori, which colonize the human stomach and are associated with peptic ulcers and gastric cancer.
-
B.
Escherichia coli
Escherichia coli is a widely studied, rod-shaped bacterium commonly found in the intestines of warm-blooded animals and extensively used as a model organism in microbiology and genetics.
-
C.
Campylobacter
Campylobacter is a genus of bacteria that commonly causes foodborne gastrointestinal infections in humans, often associated with undercooked poultry.
-
D.
Vibrio cholerae
Vibrio cholerae is a Gram-negative, comma-shaped bacterium that causes the acute diarrheal disease cholera in humans.
-
E.
Bacillus anthracis
Bacillus anthracis is a Gram-positive, spore-forming bacterium that causes the disease anthrax in humans and animals.
- F. None of above. chosen
Provenance (5 batches)
The batch behind each pipeline step, in order, with when it ran. Timestamps are batch-level — stages were processed in waves, so the object chain (NER → NED1 → NEDg → NED2) reads in order, but predicate / elicitation batches can sit in a different wave.
| Step | Stage | Batch ID | Status | When |
|---|---|---|---|---|
| creating | Elicitation | batch_69d6aa9983c08190b0ef61603b69feac |
completed | April 8, 2026, 7:20 p.m. |
| NER | Named-entity recognition | batch_69d7994e32fc8190a6591d9e82b68f75 |
completed | April 9, 2026, 12:19 p.m. |
| NED1 | Entity disambiguation (via context triple) | batch_69e3c8cc77988190aad54f56dbd0f8cf |
completed | April 18, 2026, 6:09 p.m. |
| NEDg | Description generation | batch_69e3cefc00148190a1850dc6e31523c3 |
completed | April 18, 2026, 6:35 p.m. |
| NED2 | Entity disambiguation (via description) | batch_69e3d014a644819092c76aa02b573ca9 |
completed | April 18, 2026, 6:40 p.m. |
Created at: April 8, 2026, 9:26 p.m.