OneDep
E736792
OneDep is the unified deposition and annotation system used by the Protein Data Bank for submitting and curating macromolecular structure data.
Statements (47)
| Predicate | Object |
|---|---|
| instanceOf |
deposition and annotation system
ⓘ
scientific data curation system ⓘ software platform ⓘ |
| accessModel | online portal ⓘ |
| associatedWith |
PDB format
ⓘ
PDBx/mmCIF format NERFINISHED ⓘ wwPDB validation reports NERFINISHED ⓘ |
| domain |
3D biostructure data management
ⓘ
macromolecular crystallography ⓘ structural biology ⓘ |
| feature |
automated validation tools
ⓘ
curator annotation workflows ⓘ version-controlled data management ⓘ web-based deposition interface ⓘ |
| goal |
ensure consistency of biostructure annotations
ⓘ
improve data quality for the Protein Data Bank ⓘ provide a single global system for PDB depositions ⓘ |
| handlesDataType |
PDB entries
ⓘ
macromolecular complexes ⓘ nucleic acid structures ⓘ protein structures ⓘ protein–nucleic acid complexes ⓘ |
| language | web technologies ⓘ |
| maintainsRelationshipWith | Protein Data Bank archive NERFINISHED ⓘ |
| operatedBy |
PDBc
NERFINISHED
ⓘ
PDBe NERFINISHED ⓘ PDBj NERFINISHED ⓘ RCSB PDB NERFINISHED ⓘ wwPDB partner sites ⓘ |
| purpose |
annotation of macromolecular structure data
ⓘ
curation of macromolecular structure data ⓘ unified deposition of macromolecular structure data ⓘ validation of macromolecular structure data ⓘ |
| supportsMethod |
NMR spectroscopy
ⓘ
X-ray crystallography ⓘ cryo-electron microscopy ⓘ integrative or hybrid methods ⓘ |
| usedBy |
Protein Data Bank
NERFINISHED
ⓘ
Worldwide Protein Data Bank NERFINISHED ⓘ wwPDB NERFINISHED ⓘ |
| usedFor |
managing deposition metadata
ⓘ
submission of new PDB entries ⓘ updating existing PDB entries ⓘ |
| user |
NMR spectroscopists
ⓘ
cryo-EM researchers ⓘ crystallographers ⓘ structural biologists ⓘ |
Referenced by (1)
Full triples — surface form annotated when it differs from this entity's canonical label.