Triple
T9738269
| Position | Surface form | Disambiguated ID | Type / Status |
|---|---|---|---|
| Subject | Nitrosopumilus |
E236119
|
entity |
| Predicate | substrateAffinity |
P90738
|
FINISHED |
| Object | high affinity for ammonia |
—
|
LITERAL FINISHED |
How this triple was built (2 steps)
Every LLM step that produced this triple, in pipeline order — named-entity classification, the disambiguation choices (the exact options shown, with the pick highlighted), and the generated description. The batch + timestamp of each is in the Provenance table below.
NER
Named-entity recognition
gpt-5-mini
Instruction
Given a phrase, classify it is english named entity (e.g., persons, organizations, works of art) in Latin script, or not (e.g., literals, dates, URLs, verbose phrases). For disambiguation, the statement where the phrase occurs as object is also given. Please return a JSON object with `phrase` (string, the phrase being analyzed) and `is_ne` (boolean, indicating whether the phrase is a Named Entity).
Input
Phrase: high affinity for ammonia | Statement: [Nitrosopumilus, substrateAffinity, high affinity for ammonia]
PD
Predicate disambiguation
gpt-5-mini-2025-08-07
Target predicate: substrateAffinity Context triple: [Nitrosopumilus, substrateAffinity, high affinity for ammonia]
-
A.
substratePreference
Indicates a relationship where an entity tends to occur on, grow in, or utilize a particular physical material or medium as its preferred substrate.
-
B.
hasSubstrateInfluenceOn
Indicates that one substrate affects, modifies, or determines the behavior, activity, or properties of another entity or process.
-
C.
substrateRelationship
Indicates that one entity serves as a substrate upon which another entity acts, is processed, or depends in a functional relationship.
-
D.
isSubstrateOf
Indicates that one entity serves as the material or reactant upon which another entity (typically an enzyme or process) acts in a chemical or biochemical reaction.
-
E.
possibleSubstrateIn
Indicates that one entity can potentially serve as a substrate or reactant within a process, reaction, or system represented by the other entity.
- F. None of above. chosen
Provenance (4 batches)
The batch behind each pipeline step, in order, with when it ran. Timestamps are batch-level — stages were processed in waves, so the object chain (NER → NED1 → NEDg → NED2) reads in order, but predicate / elicitation batches can sit in a different wave.
| Step | Stage | Batch ID | Status | When |
|---|---|---|---|---|
| creating | Elicitation | batch_69ca84d313e88190983ee6ffd0ef60d2 |
completed | March 30, 2026, 2:12 p.m. |
| NER | Named-entity recognition | batch_69cd9ef2ba048190811d6f4251fdb270 |
completed | April 1, 2026, 10:40 p.m. |
| PD | Predicate disambiguation | batch_69cd03c6ffc88190a5e9569e19122ad5 |
completed | April 1, 2026, 11:38 a.m. |
| PDg | Predicate description generation | batch_69cd07c5c978819084abc7267a5ced80 |
completed | April 1, 2026, 11:55 a.m. |
Created at: March 30, 2026, 8:22 p.m.