Triple

T8357170
Position Surface form Disambiguated ID Type / Status
Subject Campylobacterota E196709 entity
Predicate includesTaxon P1393 FINISHED
Object Nitratiruptor
Nitratiruptor is a genus of deep-sea, thermophilic, nitrate-reducing bacteria commonly found in hydrothermal vent environments.
 E727685 NE FINISHED

How this triple was built (4 steps)

Every LLM step that produced this triple, in pipeline order — named-entity classification, the disambiguation choices (the exact options shown, with the pick highlighted), and the generated description. The batch + timestamp of each is in the Provenance table below.

NER Named-entity recognition gpt-5-mini
Instruction
Given a phrase, classify it is english named entity (e.g., persons, organizations, works of art) in Latin script, or not (e.g., literals, dates, URLs, verbose phrases). For disambiguation, the statement where the phrase occurs as object is also given. Please return a JSON object with `phrase` (string, the phrase being analyzed) and `is_ne` (boolean, indicating whether the phrase is a Named Entity).
Input
Phrase: Nitratiruptor | Statement: [Campylobacterota, includesTaxon, Nitratiruptor]
NED1 Entity disambiguation (via context triple) gpt-5-mini-2025-08-07 
Target entity: Nitratiruptor
Context triple: [Campylobacterota, includesTaxon, Nitratiruptor]
  • A. Nitrososphaera
    Nitrososphaera is a genus of ammonia-oxidizing archaea commonly found in soil and other terrestrial environments, playing a key role in the global nitrogen cycle.
  • B. Nitrosopumilus
    Nitrosopumilus is a genus of marine ammonia-oxidizing archaea that plays a key role in the global nitrogen cycle, particularly in oceanic environments.
  • C. Pyrobaculum aerophilum
    Pyrobaculum aerophilum is a hyperthermophilic archaeon that thrives in extremely high-temperature, often sulfur-rich environments and serves as a model organism for studying the biology of Crenarchaeota.
  • D. Nanoarchaeum equitans
    Nanoarchaeum equitans is a tiny symbiotic archaeon known for its extremely small genome and dependence on its host Ignicoccus for many essential metabolic functions.
  • E. Ignicoccus hospitalis
    Ignicoccus hospitalis is a hyperthermophilic archaeon that thrives in extremely hot, sulfur-rich environments and is notable for its unique cell envelope and symbiotic association with the nanoarchaeon Nanoarchaeum equitans.
  • F. None of above. chosen
  • G. Unsure - the case is ambiguous/there is not enough information to decide.
NEDg Description generation gpt-5.1
Instruction
Generate a one-sentence description of the target entity. 
You are given a context triple in the form (subject, predicate, object), where the object is the target entity. 
# Instructions
Use the triple to infer relevant information about the entity. Describe the entity based on what is most defining, well-known. 
Avoid repeating the information from the triple, unless really essential.
# Response Format
Return only the sentence: "Description: [one-sentence description of the target entity]"
Input
Entity: Nitratiruptor
Triple: [Campylobacterota, includesTaxon, Nitratiruptor]
Generated description
Nitratiruptor is a genus of deep-sea, thermophilic, nitrate-reducing bacteria commonly found in hydrothermal vent environments.
NED2 Entity disambiguation (via description) gpt-5-mini-2025-08-07 
Target entity: Nitratiruptor
Target entity description: Nitratiruptor is a genus of deep-sea, thermophilic, nitrate-reducing bacteria commonly found in hydrothermal vent environments.
  • A. Nitrososphaera
    Nitrososphaera is a genus of ammonia-oxidizing archaea commonly found in soil and other terrestrial environments, playing a key role in the global nitrogen cycle.
  • B. Nitrosopumilus
    Nitrosopumilus is a genus of marine ammonia-oxidizing archaea that plays a key role in the global nitrogen cycle, particularly in oceanic environments.
  • C. Pyrobaculum aerophilum
    Pyrobaculum aerophilum is a hyperthermophilic archaeon that thrives in extremely high-temperature, often sulfur-rich environments and serves as a model organism for studying the biology of Crenarchaeota.
  • D. Nanoarchaeum equitans
    Nanoarchaeum equitans is a tiny symbiotic archaeon known for its extremely small genome and dependence on its host Ignicoccus for many essential metabolic functions.
  • E. Ignicoccus hospitalis
    Ignicoccus hospitalis is a hyperthermophilic archaeon that thrives in extremely hot, sulfur-rich environments and is notable for its unique cell envelope and symbiotic association with the nanoarchaeon Nanoarchaeum equitans.
  • F. None of above. chosen

Provenance (5 batches)

The batch behind each pipeline step, in order, with when it ran. Timestamps are batch-level — stages were processed in waves, so the object chain (NER → NED1 → NEDg → NED2) reads in order, but predicate / elicitation batches can sit in a different wave.

Step Stage Batch ID Status When
creating Elicitation batch_69ca82f08b348190bfb7881944bbff6f completed March 30, 2026, 2:04 p.m.
NER Named-entity recognition batch_69cb804b57f88190907a4e4e389caf5f completed March 31, 2026, 8:05 a.m.
NED1 Entity disambiguation (via context triple) batch_69cdc765e5c4819096b5f9129ee416a0 completed April 2, 2026, 1:33 a.m.
NEDg Description generation batch_69cdcc86626c8190a4206feedea24b41 completed April 2, 2026, 1:55 a.m.
NED2 Entity disambiguation (via description) batch_69cdcde02e088190be8220f7d18d6700 completed April 2, 2026, 2:01 a.m.
Created at: March 30, 2026, 5:59 p.m.