Triple
T7735386
| Position | Surface form | Disambiguated ID | Type / Status |
|---|---|---|---|
| Subject | Europe PubMed Central |
E175365
|
entity |
| Predicate | operatedBy |
P86
|
FINISHED |
| Object | EMBL-EBI |
E684891
|
NE FINISHED |
How this triple was built (2 steps)
Every LLM step that produced this triple, in pipeline order — named-entity classification, the disambiguation choices (the exact options shown, with the pick highlighted), and the generated description. The batch + timestamp of each is in the Provenance table below.
NER
Named-entity recognition
gpt-5-mini
Instruction
Given a phrase, classify it is english named entity (e.g., persons, organizations, works of art) in Latin script, or not (e.g., literals, dates, URLs, verbose phrases). For disambiguation, the statement where the phrase occurs as object is also given. Please return a JSON object with `phrase` (string, the phrase being analyzed) and `is_ne` (boolean, indicating whether the phrase is a Named Entity).
Input
Phrase: EMBL-EBI | Statement: [Europe PubMed Central, operatedBy, EMBL-EBI]
NED1
Entity disambiguation (via context triple)
gpt-5-mini-2025-08-07
Target entity: EMBL-EBI Context triple: [Europe PubMed Central, operatedBy, EMBL-EBI]
-
A.
European Bioinformatics Institute
chosen
The European Bioinformatics Institute (EMBL-EBI) is a major international research center that develops and hosts biological data resources and tools to support life science research worldwide.
-
B.
National Center for Biotechnology Information
The National Center for Biotechnology Information (NCBI) is a U.S. government bioinformatics institution that develops and hosts major biological databases and tools for biomedical research.
-
C.
Wellcome Sanger Institute
The Wellcome Sanger Institute is a leading British genomics research center renowned for its pivotal role in the Human Genome Project and large-scale DNA sequencing initiatives.
-
D.
NCBI E-utilities API
The NCBI E-utilities API is a set of programmatic web services that allow automated querying, retrieval, and integration of data from NCBI databases such as PubMed.
-
E.
Protein Data Bank
The Protein Data Bank is a global repository that archives and provides open access to 3D structural data of biological macromolecules such as proteins and nucleic acids.
- F. None of above.
- G. Unsure - the case is ambiguous/there is not enough information to decide.
Provenance (3 batches)
The batch behind each pipeline step, in order, with when it ran. Timestamps are batch-level — stages were processed in waves, so the object chain (NER → NED1 → NEDg → NED2) reads in order, but predicate / elicitation batches can sit in a different wave.
| Step | Stage | Batch ID | Status | When |
|---|---|---|---|---|
| creating | Elicitation | batch_69c6995e912c81909a49a2657103f786 |
completed | March 27, 2026, 2:51 p.m. |
| NER | Named-entity recognition | batch_69c7033afbb881909b7ed2cc8f6c27c3 |
completed | March 27, 2026, 10:22 p.m. |
| NED1 | Entity disambiguation (via context triple) | batch_69c8be355e04819088598b5c7d61b848 |
completed | March 29, 2026, 5:52 a.m. |
Created at: March 27, 2026, 4:06 p.m.