Triple
T6387533
| Position | Surface form | Disambiguated ID | Type / Status |
|---|---|---|---|
| Subject | Crystallographic Information Framework |
E143736
|
entity |
| Predicate | relatedStandard |
P37
|
FINISHED |
| Object |
mmCIF
mmCIF is a standardized text-based file format used to store and exchange macromolecular crystallographic data, particularly for protein and nucleic acid structures.
|
E143736
|
NE FINISHED |
How this triple was built (4 steps)
Every LLM step that produced this triple, in pipeline order — named-entity classification, the disambiguation choices (the exact options shown, with the pick highlighted), and the generated description. The batch + timestamp of each is in the Provenance table below.
NER
Named-entity recognition
gpt-5-mini
Instruction
Given a phrase, classify it is english named entity (e.g., persons, organizations, works of art) in Latin script, or not (e.g., literals, dates, URLs, verbose phrases). For disambiguation, the statement where the phrase occurs as object is also given. Please return a JSON object with `phrase` (string, the phrase being analyzed) and `is_ne` (boolean, indicating whether the phrase is a Named Entity).
Input
Phrase: mmCIF | Statement: [Crystallographic Information Framework, relatedStandard, mmCIF]
NED1
Entity disambiguation (via context triple)
gpt-5-mini-2025-08-07
Target entity: mmCIF Context triple: [Crystallographic Information Framework, relatedStandard, mmCIF]
-
A.
Crystallographic Information Framework
The Crystallographic Information Framework is a standardized data format and ontology used worldwide for representing, exchanging, and archiving crystallographic and related structural science data.
-
B.
IUCrData
IUCrData is an open-access crystallography data journal published by the International Union of Crystallography, focusing on brief reports of crystal structure determinations and related datasets.
-
C.
Cif
Cif is a household cleaning product brand known for its creams and sprays used to remove tough dirt and stains from various surfaces.
-
D.
Protein Data Bank
The Protein Data Bank is a global repository that archives and provides open access to 3D structural data of biological macromolecules such as proteins and nucleic acids.
-
E.
Acta Crystallographica Section F
Acta Crystallographica Section F is a peer-reviewed scientific journal focusing on rapid publication of structural biology and crystallography research, particularly macromolecular crystal structures and related methods.
- F. None of above. chosen
- G. Unsure - the case is ambiguous/there is not enough information to decide.
NEDg
Description generation
gpt-5.1
Instruction
Generate a one-sentence description of the target entity. You are given a context triple in the form (subject, predicate, object), where the object is the target entity. # Instructions Use the triple to infer relevant information about the entity. Describe the entity based on what is most defining, well-known. Avoid repeating the information from the triple, unless really essential. # Response Format Return only the sentence: "Description: [one-sentence description of the target entity]"
Input
Entity: mmCIF Triple: [Crystallographic Information Framework, relatedStandard, mmCIF]
Generated description
mmCIF is a standardized text-based file format used to store and exchange macromolecular crystallographic data, particularly for protein and nucleic acid structures.
NED2
Entity disambiguation (via description)
gpt-5-mini-2025-08-07
Target entity: mmCIF Target entity description: mmCIF is a standardized text-based file format used to store and exchange macromolecular crystallographic data, particularly for protein and nucleic acid structures.
-
A.
Crystallographic Information Framework
chosen
The Crystallographic Information Framework is a standardized data format and ontology used worldwide for representing, exchanging, and archiving crystallographic and related structural science data.
-
B.
IUCrData
IUCrData is an open-access crystallography data journal published by the International Union of Crystallography, focusing on brief reports of crystal structure determinations and related datasets.
-
C.
Cif
Cif is a household cleaning product brand known for its creams and sprays used to remove tough dirt and stains from various surfaces.
-
D.
Protein Data Bank
The Protein Data Bank is a global repository that archives and provides open access to 3D structural data of biological macromolecules such as proteins and nucleic acids.
-
E.
Acta Crystallographica Section F
Acta Crystallographica Section F is a peer-reviewed scientific journal focusing on rapid publication of structural biology and crystallography research, particularly macromolecular crystal structures and related methods.
- F. None of above.
Provenance (5 batches)
The batch behind each pipeline step, in order, with when it ran. Timestamps are batch-level — stages were processed in waves, so the object chain (NER → NED1 → NEDg → NED2) reads in order, but predicate / elicitation batches can sit in a different wave.
| Step | Stage | Batch ID | Status | When |
|---|---|---|---|---|
| creating | Elicitation | batch_69c008dac1ec81909cef8157ccd69962 |
completed | March 22, 2026, 3:20 p.m. |
| NER | Named-entity recognition | batch_69c06869dfb88190aeb84c6c61414888 |
completed | March 22, 2026, 10:08 p.m. |
| NED1 | Entity disambiguation (via context triple) | batch_69c6387dc8888190ba63efcc9aff41b2 |
completed | March 27, 2026, 7:57 a.m. |
| NEDg | Description generation | batch_69c63b0165ac8190bb6001504d4abfcc |
completed | March 27, 2026, 8:08 a.m. |
| NED2 | Entity disambiguation (via description) | batch_69c63b6373e88190b676ee85be8c06fb |
completed | March 27, 2026, 8:10 a.m. |
Created at: March 22, 2026, 4:34 p.m.