Triple

T6387533
Position Surface form Disambiguated ID Type / Status
Subject Crystallographic Information Framework E143736 entity
Predicate relatedStandard P37 FINISHED
Object mmCIF
mmCIF is a standardized text-based file format used to store and exchange macromolecular crystallographic data, particularly for protein and nucleic acid structures.
E143736 NE FINISHED

How this triple was built (4 steps)

Every LLM step that produced this triple, in pipeline order — named-entity classification, the disambiguation choices (the exact options shown, with the pick highlighted), and the generated description. The batch + timestamp of each is in the Provenance table below.

NER Named-entity recognition gpt-5-mini
Instruction
Given a phrase, classify it is english named entity (e.g., persons, organizations, works of art) in Latin script, or not (e.g., literals, dates, URLs, verbose phrases). For disambiguation, the statement where the phrase occurs as object is also given. Please return a JSON object with `phrase` (string, the phrase being analyzed) and `is_ne` (boolean, indicating whether the phrase is a Named Entity).
Input
Phrase: mmCIF | Statement: [Crystallographic Information Framework, relatedStandard, mmCIF]
NED1 Entity disambiguation (via context triple) gpt-5-mini-2025-08-07
Target entity: mmCIF
Context triple: [Crystallographic Information Framework, relatedStandard, mmCIF]
  • A. Crystallographic Information Framework
    The Crystallographic Information Framework is a standardized data format and ontology used worldwide for representing, exchanging, and archiving crystallographic and related structural science data.
  • B. IUCrData
    IUCrData is an open-access crystallography data journal published by the International Union of Crystallography, focusing on brief reports of crystal structure determinations and related datasets.
  • C. Cif
    Cif is a household cleaning product brand known for its creams and sprays used to remove tough dirt and stains from various surfaces.
  • D. Protein Data Bank
    The Protein Data Bank is a global repository that archives and provides open access to 3D structural data of biological macromolecules such as proteins and nucleic acids.
  • E. Acta Crystallographica Section F
    Acta Crystallographica Section F is a peer-reviewed scientific journal focusing on rapid publication of structural biology and crystallography research, particularly macromolecular crystal structures and related methods.
  • F. None of above. chosen
  • G. Unsure - the case is ambiguous/there is not enough information to decide.
NEDg Description generation gpt-5.1
Instruction
Generate a one-sentence description of the target entity. 
You are given a context triple in the form (subject, predicate, object), where the object is the target entity. 
# Instructions
Use the triple to infer relevant information about the entity. Describe the entity based on what is most defining, well-known. 
Avoid repeating the information from the triple, unless really essential.
# Response Format
Return only the sentence: "Description: [one-sentence description of the target entity]"
Input
Entity: mmCIF
Triple: [Crystallographic Information Framework, relatedStandard, mmCIF]
Generated description
mmCIF is a standardized text-based file format used to store and exchange macromolecular crystallographic data, particularly for protein and nucleic acid structures.
NED2 Entity disambiguation (via description) gpt-5-mini-2025-08-07
Target entity: mmCIF
Target entity description: mmCIF is a standardized text-based file format used to store and exchange macromolecular crystallographic data, particularly for protein and nucleic acid structures.
  • A. Crystallographic Information Framework chosen
    The Crystallographic Information Framework is a standardized data format and ontology used worldwide for representing, exchanging, and archiving crystallographic and related structural science data.
  • B. IUCrData
    IUCrData is an open-access crystallography data journal published by the International Union of Crystallography, focusing on brief reports of crystal structure determinations and related datasets.
  • C. Cif
    Cif is a household cleaning product brand known for its creams and sprays used to remove tough dirt and stains from various surfaces.
  • D. Protein Data Bank
    The Protein Data Bank is a global repository that archives and provides open access to 3D structural data of biological macromolecules such as proteins and nucleic acids.
  • E. Acta Crystallographica Section F
    Acta Crystallographica Section F is a peer-reviewed scientific journal focusing on rapid publication of structural biology and crystallography research, particularly macromolecular crystal structures and related methods.
  • F. None of above.

Provenance (5 batches)

The batch behind each pipeline step, in order, with when it ran. Timestamps are batch-level — stages were processed in waves, so the object chain (NER → NED1 → NEDg → NED2) reads in order, but predicate / elicitation batches can sit in a different wave.

Step Stage Batch ID Status When
creating Elicitation batch_69c008dac1ec81909cef8157ccd69962 completed March 22, 2026, 3:20 p.m.
NER Named-entity recognition batch_69c06869dfb88190aeb84c6c61414888 completed March 22, 2026, 10:08 p.m.
NED1 Entity disambiguation (via context triple) batch_69c6387dc8888190ba63efcc9aff41b2 completed March 27, 2026, 7:57 a.m.
NEDg Description generation batch_69c63b0165ac8190bb6001504d4abfcc completed March 27, 2026, 8:08 a.m.
NED2 Entity disambiguation (via description) batch_69c63b6373e88190b676ee85be8c06fb completed March 27, 2026, 8:10 a.m.
Created at: March 22, 2026, 4:34 p.m.