Triple
T6098429
| Position | Surface form | Disambiguated ID | Type / Status |
|---|---|---|---|
| Subject | NCBI E-utilities API |
E135932
|
entity |
| Predicate | maintainedBy |
P86
|
FINISHED |
| Object |
NCBI Entrez Programming Utilities team
The NCBI Entrez Programming Utilities team is the group at the National Center for Biotechnology Information responsible for developing and supporting programmatic access tools to NCBI’s biological databases.
|
E135932
|
NE FINISHED |
How this triple was built (4 steps)
Every LLM step that produced this triple, in pipeline order — named-entity classification, the disambiguation choices (the exact options shown, with the pick highlighted), and the generated description. The batch + timestamp of each is in the Provenance table below.
NER
Named-entity recognition
gpt-5-mini
Instruction
Given a phrase, classify it is english named entity (e.g., persons, organizations, works of art) in Latin script, or not (e.g., literals, dates, URLs, verbose phrases). For disambiguation, the statement where the phrase occurs as object is also given. Please return a JSON object with `phrase` (string, the phrase being analyzed) and `is_ne` (boolean, indicating whether the phrase is a Named Entity).
Input
Phrase: NCBI Entrez Programming Utilities team | Statement: [NCBI E-utilities API, maintainedBy, NCBI Entrez Programming Utilities team]
NED1
Entity disambiguation (via context triple)
gpt-5-mini-2025-08-07
Target entity: NCBI Entrez Programming Utilities team Context triple: [NCBI E-utilities API, maintainedBy, NCBI Entrez Programming Utilities team]
-
A.
NCBI E-utilities API
The NCBI E-utilities API is a set of programmatic web services that allow automated querying, retrieval, and integration of data from NCBI databases such as PubMed.
-
B.
National Center for Biotechnology Information
The National Center for Biotechnology Information (NCBI) is a U.S. government bioinformatics institution that develops and hosts major biological databases and tools for biomedical research.
-
C.
Entrez system
The Entrez system is an integrated search and retrieval platform from the National Center for Biotechnology Information (NCBI) that provides unified access to a wide range of biomedical databases, including literature, sequences, genomes, and more.
-
D.
UniProt protein sequences
UniProt protein sequences are a comprehensive, curated collection of protein sequence data that serves as a primary reference resource for protein information in biological and biomedical research.
-
E.
NCBI Bookshelf
NCBI Bookshelf is a free online resource from the National Center for Biotechnology Information that provides access to a wide range of biomedical books, reports, and other full-text scholarly literature.
- F. None of above. chosen
- G. Unsure - the case is ambiguous/there is not enough information to decide.
NEDg
Description generation
gpt-5.1
Instruction
Generate a one-sentence description of the target entity. You are given a context triple in the form (subject, predicate, object), where the object is the target entity. # Instructions Use the triple to infer relevant information about the entity. Describe the entity based on what is most defining, well-known. Avoid repeating the information from the triple, unless really essential. # Response Format Return only the sentence: "Description: [one-sentence description of the target entity]"
Input
Entity: NCBI Entrez Programming Utilities team Triple: [NCBI E-utilities API, maintainedBy, NCBI Entrez Programming Utilities team]
Generated description
The NCBI Entrez Programming Utilities team is the group at the National Center for Biotechnology Information responsible for developing and supporting programmatic access tools to NCBI’s biological databases.
NED2
Entity disambiguation (via description)
gpt-5-mini-2025-08-07
Target entity: NCBI Entrez Programming Utilities team Target entity description: The NCBI Entrez Programming Utilities team is the group at the National Center for Biotechnology Information responsible for developing and supporting programmatic access tools to NCBI’s biological databases.
-
A.
NCBI E-utilities API
chosen
The NCBI E-utilities API is a set of programmatic web services that allow automated querying, retrieval, and integration of data from NCBI databases such as PubMed.
-
B.
National Center for Biotechnology Information
The National Center for Biotechnology Information (NCBI) is a U.S. government bioinformatics institution that develops and hosts major biological databases and tools for biomedical research.
-
C.
BioProject database
The BioProject database is an NCBI resource that organizes and links together data from large-scale biological research projects, such as genome sequencing and functional genomics studies.
-
D.
Entrez system
The Entrez system is an integrated search and retrieval platform from the National Center for Biotechnology Information (NCBI) that provides unified access to a wide range of biomedical databases, including literature, sequences, genomes, and more.
-
E.
UniProt protein sequences
UniProt protein sequences are a comprehensive, curated collection of protein sequence data that serves as a primary reference resource for protein information in biological and biomedical research.
- F. None of above.
Provenance (5 batches)
The batch behind each pipeline step, in order, with when it ran. Timestamps are batch-level — stages were processed in waves, so the object chain (NER → NED1 → NEDg → NED2) reads in order, but predicate / elicitation batches can sit in a different wave.
| Step | Stage | Batch ID | Status | When |
|---|---|---|---|---|
| creating | Elicitation | batch_69c0087cd3c48190b459848c72d84eb1 |
completed | March 22, 2026, 3:19 p.m. |
| NER | Named-entity recognition | batch_69c05a9a02888190ac201acd14c3fc31 |
completed | March 22, 2026, 9:09 p.m. |
| NED1 | Entity disambiguation (via context triple) | batch_69c125475548819086b733a80056eba5 |
completed | March 23, 2026, 11:34 a.m. |
| NEDg | Description generation | batch_69c128753cd8819096edb3c817bfae10 |
completed | March 23, 2026, 11:48 a.m. |
| NED2 | Entity disambiguation (via description) | batch_69c129134ce08190ada54a7b3eda27f4 |
completed | March 23, 2026, 11:50 a.m. |
Created at: March 22, 2026, 4:12 p.m.