Triple
T6098281
| Position | Surface form | Disambiguated ID | Type / Status |
|---|---|---|---|
| Subject | Entrez system |
E135930
|
entity |
| Predicate | hasPart |
P35
|
FINISHED |
| Object | OMIM database |
E135929
|
NE FINISHED |
How this triple was built (2 steps)
Every LLM step that produced this triple, in pipeline order — named-entity classification, the disambiguation choices (the exact options shown, with the pick highlighted), and the generated description. The batch + timestamp of each is in the Provenance table below.
NER
Named-entity recognition
gpt-5-mini
Instruction
Given a phrase, classify it is english named entity (e.g., persons, organizations, works of art) in Latin script, or not (e.g., literals, dates, URLs, verbose phrases). For disambiguation, the statement where the phrase occurs as object is also given. Please return a JSON object with `phrase` (string, the phrase being analyzed) and `is_ne` (boolean, indicating whether the phrase is a Named Entity).
Input
Phrase: OMIM database | Statement: [Entrez system, hasPart, OMIM database]
NED1
Entity disambiguation (via context triple)
gpt-5-mini-2025-08-07
Target entity: OMIM database Context triple: [Entrez system, hasPart, OMIM database]
-
A.
Genetic and Rare Diseases Information Center
The Genetic and Rare Diseases Information Center is a U.S. government resource that provides reliable, up-to-date information and support to patients, families, and healthcare professionals about genetic and rare conditions.
-
B.
ORDR
ORDR is the Office of Rare Diseases Research, a U.S. government program that coordinates and supports research, information, and collaboration related to rare diseases.
-
C.
National Center for Biotechnology Information
chosen
The National Center for Biotechnology Information (NCBI) is a U.S. government bioinformatics institution that develops and hosts major biological databases and tools for biomedical research.
-
D.
NCBI Bookshelf
NCBI Bookshelf is a free online resource from the National Center for Biotechnology Information that provides access to a wide range of biomedical books, reports, and other full-text scholarly literature.
-
E.
HGNC:28350
HGNC:28350 is the HGNC gene identifier assigned to the human C9orf72 gene, which is notably associated with familial amyotrophic lateral sclerosis (ALS) and frontotemporal dementia (FTD).
- F. None of above.
- G. Unsure - the case is ambiguous/there is not enough information to decide.
Provenance (3 batches)
The batch behind each pipeline step, in order, with when it ran. Timestamps are batch-level — stages were processed in waves, so the object chain (NER → NED1 → NEDg → NED2) reads in order, but predicate / elicitation batches can sit in a different wave.
| Step | Stage | Batch ID | Status | When |
|---|---|---|---|---|
| creating | Elicitation | batch_69c0087cd3c48190b459848c72d84eb1 |
completed | March 22, 2026, 3:19 p.m. |
| NER | Named-entity recognition | batch_69c05a9a02888190ac201acd14c3fc31 |
completed | March 22, 2026, 9:09 p.m. |
| NED1 | Entity disambiguation (via context triple) | batch_69c1254365708190b8feb95dfb2b730d |
completed | March 23, 2026, 11:34 a.m. |
Created at: March 22, 2026, 4:12 p.m.