Triple
T6098250
| Position | Surface form | Disambiguated ID | Type / Status |
|---|---|---|---|
| Subject | National Center for Biotechnology Information |
E135929
|
entity |
| Predicate | hasService |
P182
|
FINISHED |
| Object |
Genome Data Viewer
Genome Data Viewer is an NCBI web-based genome browser that allows users to visualize, explore, and analyze annotated genomic sequences and features.
|
E569117
|
NE FINISHED |
How this triple was built (4 steps)
Every LLM step that produced this triple, in pipeline order — named-entity classification, the disambiguation choices (the exact options shown, with the pick highlighted), and the generated description. The batch + timestamp of each is in the Provenance table below.
NER
Named-entity recognition
gpt-5-mini
Instruction
Given a phrase, classify it is english named entity (e.g., persons, organizations, works of art) in Latin script, or not (e.g., literals, dates, URLs, verbose phrases). For disambiguation, the statement where the phrase occurs as object is also given. Please return a JSON object with `phrase` (string, the phrase being analyzed) and `is_ne` (boolean, indicating whether the phrase is a Named Entity).
Input
Phrase: Genome Data Viewer | Statement: [National Center for Biotechnology Information, hasService, Genome Data Viewer]
NED1
Entity disambiguation (via context triple)
gpt-5-mini-2025-08-07
Target entity: Genome Data Viewer Context triple: [National Center for Biotechnology Information, hasService, Genome Data Viewer]
-
A.
Edico Genome
Edico Genome was a biotechnology company specializing in high-speed genomic data analysis through its DRAGEN bio-IT platform and FPGA-based acceleration technology.
-
B.
GEO reports
GEO reports are flagship United Nations environmental assessment publications that periodically evaluate the state of the global environment, emerging trends, and policy options for sustainable development.
-
C.
Centre for Genomics and Bioinformatics
The Centre for Genomics and Bioinformatics is a specialized research unit focused on applying genomic and bioinformatic methods to study public health–relevant pathogens and diseases.
-
D.
Genomic Science program
The Genomic Science program is a U.S. Department of Energy research initiative that applies genomics and systems biology to understand and harness biological processes for energy, environmental, and climate-related applications.
-
E.
Bioconductor
Bioconductor is an open-source project that provides R packages and tools for the analysis and comprehension of high-throughput genomic and biological data.
- F. None of above. chosen
- G. Unsure - the case is ambiguous/there is not enough information to decide.
NEDg
Description generation
gpt-5.1
Instruction
Generate a one-sentence description of the target entity. You are given a context triple in the form (subject, predicate, object), where the object is the target entity. # Instructions Use the triple to infer relevant information about the entity. Describe the entity based on what is most defining, well-known. Avoid repeating the information from the triple, unless really essential. # Response Format Return only the sentence: "Description: [one-sentence description of the target entity]"
Input
Entity: Genome Data Viewer Triple: [National Center for Biotechnology Information, hasService, Genome Data Viewer]
Generated description
Genome Data Viewer is an NCBI web-based genome browser that allows users to visualize, explore, and analyze annotated genomic sequences and features.
NED2
Entity disambiguation (via description)
gpt-5-mini-2025-08-07
Target entity: Genome Data Viewer Target entity description: Genome Data Viewer is an NCBI web-based genome browser that allows users to visualize, explore, and analyze annotated genomic sequences and features.
-
A.
Edico Genome
Edico Genome was a biotechnology company specializing in high-speed genomic data analysis through its DRAGEN bio-IT platform and FPGA-based acceleration technology.
-
B.
GEO reports
GEO reports are flagship United Nations environmental assessment publications that periodically evaluate the state of the global environment, emerging trends, and policy options for sustainable development.
-
C.
Centre for Genomics and Bioinformatics
The Centre for Genomics and Bioinformatics is a specialized research unit focused on applying genomic and bioinformatic methods to study public health–relevant pathogens and diseases.
-
D.
Genomic Science program
The Genomic Science program is a U.S. Department of Energy research initiative that applies genomics and systems biology to understand and harness biological processes for energy, environmental, and climate-related applications.
-
E.
Bioconductor
Bioconductor is an open-source project that provides R packages and tools for the analysis and comprehension of high-throughput genomic and biological data.
- F. None of above. chosen
Provenance (5 batches)
The batch behind each pipeline step, in order, with when it ran. Timestamps are batch-level — stages were processed in waves, so the object chain (NER → NED1 → NEDg → NED2) reads in order, but predicate / elicitation batches can sit in a different wave.
| Step | Stage | Batch ID | Status | When |
|---|---|---|---|---|
| creating | Elicitation | batch_69c0087cd3c48190b459848c72d84eb1 |
completed | March 22, 2026, 3:19 p.m. |
| NER | Named-entity recognition | batch_69c05a9a02888190ac201acd14c3fc31 |
completed | March 22, 2026, 9:09 p.m. |
| NED1 | Entity disambiguation (via context triple) | batch_69c1254365708190b8feb95dfb2b730d |
completed | March 23, 2026, 11:34 a.m. |
| NEDg | Description generation | batch_69c125d888cc819092b765d47f1d9f9f |
completed | March 23, 2026, 11:36 a.m. |
| NED2 | Entity disambiguation (via description) | batch_69c126f308988190ab6cb6c79ea12877 |
completed | March 23, 2026, 11:41 a.m. |
Created at: March 22, 2026, 4:12 p.m.