Triple
T6098240
| Position | Surface form | Disambiguated ID | Type / Status |
|---|---|---|---|
| Subject | National Center for Biotechnology Information |
E135929
|
entity |
| Predicate | hasDatabase |
P11852
|
FINISHED |
| Object |
RefSeq
RefSeq is a curated, non-redundant collection of reference DNA, RNA, and protein sequences maintained by the National Center for Biotechnology Information for use in genome annotation and biological research.
|
E569113
|
NE FINISHED |
How this triple was built (4 steps)
Every LLM step that produced this triple, in pipeline order — named-entity classification, the disambiguation choices (the exact options shown, with the pick highlighted), and the generated description. The batch + timestamp of each is in the Provenance table below.
NER
Named-entity recognition
gpt-5-mini
Instruction
Given a phrase, classify it is english named entity (e.g., persons, organizations, works of art) in Latin script, or not (e.g., literals, dates, URLs, verbose phrases). For disambiguation, the statement where the phrase occurs as object is also given. Please return a JSON object with `phrase` (string, the phrase being analyzed) and `is_ne` (boolean, indicating whether the phrase is a Named Entity).
Input
Phrase: RefSeq | Statement: [National Center for Biotechnology Information, hasDatabase, RefSeq]
NED1
Entity disambiguation (via context triple)
gpt-5-mini-2025-08-07
Target entity: RefSeq Context triple: [National Center for Biotechnology Information, hasDatabase, RefSeq]
-
A.
RSEQ
RSEQ is the governing body that organizes and oversees student sports and athletic competitions across Quebec’s educational institutions.
-
B.
UniProt protein sequences
UniProt protein sequences are a comprehensive, curated collection of protein sequence data that serves as a primary reference resource for protein information in biological and biomedical research.
-
C.
NCBI E-utilities API
The NCBI E-utilities API is a set of programmatic web services that allow automated querying, retrieval, and integration of data from NCBI databases such as PubMed.
-
D.
ENSB
ENSB is the ICAO airport code for Svalbard Airport, Longyear, the main air gateway to the Svalbard archipelago in Norway.
-
E.
Edico Genome
Edico Genome was a biotechnology company specializing in high-speed genomic data analysis through its DRAGEN bio-IT platform and FPGA-based acceleration technology.
- F. None of above. chosen
- G. Unsure - the case is ambiguous/there is not enough information to decide.
NEDg
Description generation
gpt-5.1
Instruction
Generate a one-sentence description of the target entity. You are given a context triple in the form (subject, predicate, object), where the object is the target entity. # Instructions Use the triple to infer relevant information about the entity. Describe the entity based on what is most defining, well-known. Avoid repeating the information from the triple, unless really essential. # Response Format Return only the sentence: "Description: [one-sentence description of the target entity]"
Input
Entity: RefSeq Triple: [National Center for Biotechnology Information, hasDatabase, RefSeq]
Generated description
RefSeq is a curated, non-redundant collection of reference DNA, RNA, and protein sequences maintained by the National Center for Biotechnology Information for use in genome annotation and biological research.
NED2
Entity disambiguation (via description)
gpt-5-mini-2025-08-07
Target entity: RefSeq Target entity description: RefSeq is a curated, non-redundant collection of reference DNA, RNA, and protein sequences maintained by the National Center for Biotechnology Information for use in genome annotation and biological research.
-
A.
RSEQ
RSEQ is the governing body that organizes and oversees student sports and athletic competitions across Quebec’s educational institutions.
-
B.
UniProt protein sequences
UniProt protein sequences are a comprehensive, curated collection of protein sequence data that serves as a primary reference resource for protein information in biological and biomedical research.
-
C.
NCBI E-utilities API
The NCBI E-utilities API is a set of programmatic web services that allow automated querying, retrieval, and integration of data from NCBI databases such as PubMed.
-
D.
ENSB
ENSB is the ICAO airport code for Svalbard Airport, Longyear, the main air gateway to the Svalbard archipelago in Norway.
-
E.
Edico Genome
Edico Genome was a biotechnology company specializing in high-speed genomic data analysis through its DRAGEN bio-IT platform and FPGA-based acceleration technology.
- F. None of above. chosen
Provenance (5 batches)
The batch behind each pipeline step, in order, with when it ran. Timestamps are batch-level — stages were processed in waves, so the object chain (NER → NED1 → NEDg → NED2) reads in order, but predicate / elicitation batches can sit in a different wave.
| Step | Stage | Batch ID | Status | When |
|---|---|---|---|---|
| creating | Elicitation | batch_69c0087cd3c48190b459848c72d84eb1 |
completed | March 22, 2026, 3:19 p.m. |
| NER | Named-entity recognition | batch_69c05a9a02888190ac201acd14c3fc31 |
completed | March 22, 2026, 9:09 p.m. |
| NED1 | Entity disambiguation (via context triple) | batch_69c1254365708190b8feb95dfb2b730d |
completed | March 23, 2026, 11:34 a.m. |
| NEDg | Description generation | batch_69c125d888cc819092b765d47f1d9f9f |
completed | March 23, 2026, 11:36 a.m. |
| NED2 | Entity disambiguation (via description) | batch_69c126f308988190ab6cb6c79ea12877 |
completed | March 23, 2026, 11:41 a.m. |
Created at: March 22, 2026, 4:12 p.m.