Triple

T6098237
Position Surface form Disambiguated ID Type / Status
Subject National Center for Biotechnology Information E135929 entity
Predicate hasDatabase P11852 FINISHED
Object GenBank
GenBank is a comprehensive public database of nucleotide sequences and their associated annotation, widely used as a primary resource for genetic and genomic research.
 E570176 NE FINISHED

How this triple was built (4 steps)

Every LLM step that produced this triple, in pipeline order — named-entity classification, the disambiguation choices (the exact options shown, with the pick highlighted), and the generated description. The batch + timestamp of each is in the Provenance table below.

NER Named-entity recognition gpt-5-mini
Instruction
Given a phrase, classify it is english named entity (e.g., persons, organizations, works of art) in Latin script, or not (e.g., literals, dates, URLs, verbose phrases). For disambiguation, the statement where the phrase occurs as object is also given. Please return a JSON object with `phrase` (string, the phrase being analyzed) and `is_ne` (boolean, indicating whether the phrase is a Named Entity).
Input
Phrase: GenBank | Statement: [National Center for Biotechnology Information, hasDatabase, GenBank]
NED1 Entity disambiguation (via context triple) gpt-5-mini-2025-08-07 
Target entity: GenBank
Context triple: [National Center for Biotechnology Information, hasDatabase, GenBank]
  • A. NCBI E-utilities API
    The NCBI E-utilities API is a set of programmatic web services that allow automated querying, retrieval, and integration of data from NCBI databases such as PubMed.
  • B. National Center for Biotechnology Information
    The National Center for Biotechnology Information (NCBI) is a U.S. government bioinformatics institution that develops and hosts major biological databases and tools for biomedical research.
  • C. UniGene database
    The UniGene database is a now-retired NCBI resource that organized expressed sequence tags and other gene-oriented sequence data into non-redundant clusters representing unique genes in a given organism.
  • D. BioProject database
    The BioProject database is an NCBI resource that organizes and links together data from large-scale biological research projects, such as genome sequencing and functional genomics studies.
  • E. RefSeq
    RefSeq is a curated, non-redundant collection of reference DNA, RNA, and protein sequences maintained by the National Center for Biotechnology Information for use in genome annotation and biological research.
  • F. None of above. chosen
  • G. Unsure - the case is ambiguous/there is not enough information to decide.
NEDg Description generation gpt-5.1
Instruction
Generate a one-sentence description of the target entity. 
You are given a context triple in the form (subject, predicate, object), where the object is the target entity. 
# Instructions
Use the triple to infer relevant information about the entity. Describe the entity based on what is most defining, well-known. 
Avoid repeating the information from the triple, unless really essential.
# Response Format
Return only the sentence: "Description: [one-sentence description of the target entity]"
Input
Entity: GenBank
Triple: [National Center for Biotechnology Information, hasDatabase, GenBank]
Generated description
GenBank is a comprehensive public database of nucleotide sequences and their associated annotation, widely used as a primary resource for genetic and genomic research.
NED2 Entity disambiguation (via description) gpt-5-mini-2025-08-07 
Target entity: GenBank
Target entity description: GenBank is a comprehensive public database of nucleotide sequences and their associated annotation, widely used as a primary resource for genetic and genomic research.
  • A. NCBI E-utilities API
    The NCBI E-utilities API is a set of programmatic web services that allow automated querying, retrieval, and integration of data from NCBI databases such as PubMed.
  • B. National Center for Biotechnology Information
    The National Center for Biotechnology Information (NCBI) is a U.S. government bioinformatics institution that develops and hosts major biological databases and tools for biomedical research.
  • C. UniGene database
    The UniGene database is a now-retired NCBI resource that organized expressed sequence tags and other gene-oriented sequence data into non-redundant clusters representing unique genes in a given organism.
  • D. BioProject database
    The BioProject database is an NCBI resource that organizes and links together data from large-scale biological research projects, such as genome sequencing and functional genomics studies.
  • E. RefSeq
    RefSeq is a curated, non-redundant collection of reference DNA, RNA, and protein sequences maintained by the National Center for Biotechnology Information for use in genome annotation and biological research.
  • F. None of above. chosen

Provenance (5 batches)

The batch behind each pipeline step, in order, with when it ran. Timestamps are batch-level — stages were processed in waves, so the object chain (NER → NED1 → NEDg → NED2) reads in order, but predicate / elicitation batches can sit in a different wave.

Step Stage Batch ID Status When
creating Elicitation batch_69c0087cd3c48190b459848c72d84eb1 completed March 22, 2026, 3:19 p.m.
NER Named-entity recognition batch_69c05a9a02888190ac201acd14c3fc31 completed March 22, 2026, 9:09 p.m.
NED1 Entity disambiguation (via context triple) batch_69c1358d0e18819084e2acb9e75271b4 completed March 23, 2026, 12:43 p.m.
NEDg Description generation batch_69c1362a78548190b3ccbc9089821b40 completed March 23, 2026, 12:46 p.m.
NED2 Entity disambiguation (via description) batch_69c1368d452c8190bc713c0f508250a8 completed March 23, 2026, 12:48 p.m.
Created at: March 22, 2026, 4:12 p.m.