Triple
T6004881
| Position | Surface form | Disambiguated ID | Type / Status |
|---|---|---|---|
| Subject | SOD1 |
E133684
|
entity |
| Predicate | involvedInPathway |
P38196
|
FINISHED |
| Object | reactive oxygen species detoxification pathway |
—
|
LITERAL FINISHED |
Named-entity recognition
Before disambiguation, gpt-5-mini classified whether the object phrase is a named entity — the step behind the object's LITERAL type shown above.
Instruction
Given a phrase, classify it is english named entity (e.g., persons, organizations, works of art) in Latin script, or not (e.g., literals, dates, URLs, verbose phrases). For disambiguation, the statement where the phrase occurs as object is also given. Please return a JSON object with `phrase` (string, the phrase being analyzed) and `is_ne` (boolean, indicating whether the phrase is a Named Entity).
Input
Phrase: reactive oxygen species detoxification pathway | Statement: [SOD1, involvedInPathway, reactive oxygen species detoxification pathway]
Disambiguation candidates (1 decision)
The exact options the model was shown at each disambiguation step, with the option it chose highlighted — the evidence behind this triple's disambiguated ids.
PD
Predicate disambiguation
gpt-5-mini-2025-08-07
Target predicate: involvedInPathway Context triple: [SOD1, involvedInPathway, reactive oxygen species detoxification pathway]
-
A.
hasPathway
Indicates that there exists a route, channel, or sequence of steps through which one entity leads, connects, or gives access to another.
-
B.
affectsBiologicalProcess
Indicates a relationship where one entity produces a change or influence on a biological process of another entity or system.
-
C.
regulatoryInteraction
Indicates a relationship where one entity modulates, controls, or influences the activity, expression, or function of another entity through regulatory mechanisms.
-
D.
supportsPathway
chosen
Indicates that one entity contributes to, enables, or maintains the functioning or progression of a specified pathway.
-
E.
isMetabolizedBy
Indicates that a substance is biochemically broken down or transformed through metabolic processes carried out by a specified organism, cell type, or enzyme system.
- F. None of above.
Provenance (3 batches)
| Stage | Batch ID | Job type | Status |
|---|---|---|---|
| creating | batch_69c00872444c8190bfaf1739dcec765c |
elicitation | completed |
| NER | batch_69c04f10d18081908c351170b7f58d3d |
ner | completed |
| PD | batch_69c049e3316c819087ea635fa7ee8472 |
pd | completed |
Created at: March 22, 2026, 4:06 p.m.