Triple
T4645703
| Position | Surface form | Disambiguated ID | Type / Status |
|---|---|---|---|
| Subject | Drosophila melanogaster |
E101765
|
entity |
| Predicate | hasOnlineResource |
P57
|
FINISHED |
| Object |
FlyBase
FlyBase is a comprehensive online database of genetic and genomic information for the fruit fly Drosophila and related species.
|
E459328
|
NE FINISHED |
How this triple was built (4 steps)
Every LLM step that produced this triple, in pipeline order — named-entity classification, the disambiguation choices (the exact options shown, with the pick highlighted), and the generated description. The batch + timestamp of each is in the Provenance table below.
NER
Named-entity recognition
gpt-5-mini
Instruction
Given a phrase, classify it is english named entity (e.g., persons, organizations, works of art) in Latin script, or not (e.g., literals, dates, URLs, verbose phrases). For disambiguation, the statement where the phrase occurs as object is also given. Please return a JSON object with `phrase` (string, the phrase being analyzed) and `is_ne` (boolean, indicating whether the phrase is a Named Entity).
Input
Phrase: FlyBase | Statement: [Drosophila melanogaster, hasOnlineResource, FlyBase]
NED1
Entity disambiguation (via context triple)
gpt-5-mini-2025-08-07
Target entity: FlyBase Context triple: [Drosophila melanogaster, hasOnlineResource, FlyBase]
-
A.
Drosophila melanogaster
Drosophila melanogaster is a small fruit fly species widely used as a model organism in genetics and developmental biology research.
-
B.
Caenorhabditis elegans
Caenorhabditis elegans is a small, transparent roundworm widely used as a model organism in biology and genetics due to its simple anatomy, fully mapped cell lineage, and well-characterized nervous system.
-
C.
Caenorhabditis
Caenorhabditis is a genus of small, free-living nematode worms widely used as model organisms in biological and genetic research.
-
D.
NCBI E-utilities API
The NCBI E-utilities API is a set of programmatic web services that allow automated querying, retrieval, and integration of data from NCBI databases such as PubMed.
-
E.
Musca
Musca is a small southern constellation representing a fly, located near the Southern Cross in the southern sky.
- F. None of above. chosen
- G. Unsure - the case is ambiguous/there is not enough information to decide.
NEDg
Description generation
gpt-5.1
Instruction
Generate a one-sentence description of the target entity. You are given a context triple in the form (subject, predicate, object), where the object is the target entity. # Instructions Use the triple to infer relevant information about the entity. Describe the entity based on what is most defining, well-known. Avoid repeating the information from the triple, unless really essential. # Response Format Return only the sentence: "Description: [one-sentence description of the target entity]"
Input
Entity: FlyBase Triple: [Drosophila melanogaster, hasOnlineResource, FlyBase]
Generated description
FlyBase is a comprehensive online database of genetic and genomic information for the fruit fly Drosophila and related species.
NED2
Entity disambiguation (via description)
gpt-5-mini-2025-08-07
Target entity: FlyBase Target entity description: FlyBase is a comprehensive online database of genetic and genomic information for the fruit fly Drosophila and related species.
-
A.
Drosophila melanogaster
Drosophila melanogaster is a small fruit fly species widely used as a model organism in genetics and developmental biology research.
-
B.
Caenorhabditis elegans
Caenorhabditis elegans is a small, transparent roundworm widely used as a model organism in biology and genetics due to its simple anatomy, fully mapped cell lineage, and well-characterized nervous system.
-
C.
Caenorhabditis
Caenorhabditis is a genus of small, free-living nematode worms widely used as model organisms in biological and genetic research.
-
D.
NCBI E-utilities API
The NCBI E-utilities API is a set of programmatic web services that allow automated querying, retrieval, and integration of data from NCBI databases such as PubMed.
-
E.
Musca
Musca is a small southern constellation representing a fly, located near the Southern Cross in the southern sky.
- F. None of above. chosen
Provenance (5 batches)
The batch behind each pipeline step, in order, with when it ran. Timestamps are batch-level — stages were processed in waves, so the object chain (NER → NED1 → NEDg → NED2) reads in order, but predicate / elicitation batches can sit in a different wave.
| Step | Stage | Batch ID | Status | When |
|---|---|---|---|---|
| creating | Elicitation | batch_69bd43d3bc7c81908f81fcf380476b0f |
completed | March 20, 2026, 12:55 p.m. |
| NER | Named-entity recognition | batch_69bd623815288190b21cf59a3786363d |
completed | March 20, 2026, 3:05 p.m. |
| NED1 | Entity disambiguation (via context triple) | batch_69bdfadc5dc081908d56a49895105efb |
completed | March 21, 2026, 1:56 a.m. |
| NEDg | Description generation | batch_69bdfc6751988190917ec53a8e2e27ec |
completed | March 21, 2026, 2:03 a.m. |
| NED2 | Entity disambiguation (via description) | batch_69be009e6c488190b18e1b2b4b34ecef |
completed | March 21, 2026, 2:21 a.m. |
Created at: March 20, 2026, 1:14 p.m.