Triple
T4162197
| Position | Surface form | Disambiguated ID | Type / Status |
|---|---|---|---|
| Subject | Arabidopsis thaliana |
E91554
|
entity |
| Predicate | hasReferenceAccession |
P53608
|
FINISHED |
| Object |
Col-0
Col-0 is the standard laboratory reference strain (ecotype) of the model plant Arabidopsis thaliana, widely used in plant genetics and molecular biology research.
|
E91554
|
NE FINISHED |
How this triple was built (5 steps)
Every LLM step that produced this triple, in pipeline order — named-entity classification, the disambiguation choices (the exact options shown, with the pick highlighted), and the generated description. The batch + timestamp of each is in the Provenance table below.
NER
Named-entity recognition
gpt-5-mini
Instruction
Given a phrase, classify it is english named entity (e.g., persons, organizations, works of art) in Latin script, or not (e.g., literals, dates, URLs, verbose phrases). For disambiguation, the statement where the phrase occurs as object is also given. Please return a JSON object with `phrase` (string, the phrase being analyzed) and `is_ne` (boolean, indicating whether the phrase is a Named Entity).
Input
Phrase: Col-0 | Statement: [Arabidopsis thaliana, hasReferenceAccession, Col-0]
NED1
Entity disambiguation (via context triple)
gpt-5-mini-2025-08-07
Target entity: Col-0 Context triple: [Arabidopsis thaliana, hasReferenceAccession, Col-0]
-
A.
Arabidopsis thaliana
Arabidopsis thaliana is a small flowering plant in the mustard family widely used as a model organism in plant biology and genetics.
-
B.
Pisum
Pisum is a small genus of flowering legume plants best known for the garden pea, a key model organism in genetics and an important food crop.
-
C.
Medicago
Medicago is a genus of leguminous plants best known for species like alfalfa, which are widely cultivated as high-protein forage crops and for soil improvement through nitrogen fixation.
-
D.
Glycine max
Glycine max is the cultivated soybean plant, a major legume crop grown worldwide for its protein- and oil-rich seeds used in food, feed, and industrial products.
-
E.
Cotton Caligula A.ix
Cotton Caligula A.ix is a medieval manuscript in the British Library that preserves one of the principal surviving copies of the Middle English poem "The Owl and the Nightingale."
- F. None of above. chosen
- G. Unsure - the case is ambiguous/there is not enough information to decide.
NEDg
Description generation
gpt-5.1
Instruction
Generate a one-sentence description of the target entity. You are given a context triple in the form (subject, predicate, object), where the object is the target entity. # Instructions Use the triple to infer relevant information about the entity. Describe the entity based on what is most defining, well-known. Avoid repeating the information from the triple, unless really essential. # Response Format Return only the sentence: "Description: [one-sentence description of the target entity]"
Input
Entity: Col-0 Triple: [Arabidopsis thaliana, hasReferenceAccession, Col-0]
Generated description
Col-0 is the standard laboratory reference strain (ecotype) of the model plant Arabidopsis thaliana, widely used in plant genetics and molecular biology research.
NED2
Entity disambiguation (via description)
gpt-5-mini-2025-08-07
Target entity: Col-0 Target entity description: Col-0 is the standard laboratory reference strain (ecotype) of the model plant Arabidopsis thaliana, widely used in plant genetics and molecular biology research.
-
A.
Arabidopsis thaliana
chosen
Arabidopsis thaliana is a small flowering plant in the mustard family widely used as a model organism in plant biology and genetics.
-
B.
Pisum
Pisum is a small genus of flowering legume plants best known for the garden pea, a key model organism in genetics and an important food crop.
-
C.
Medicago
Medicago is a genus of leguminous plants best known for species like alfalfa, which are widely cultivated as high-protein forage crops and for soil improvement through nitrogen fixation.
-
D.
Glycine max
Glycine max is the cultivated soybean plant, a major legume crop grown worldwide for its protein- and oil-rich seeds used in food, feed, and industrial products.
-
E.
Cotton Caligula A.ix
Cotton Caligula A.ix is a medieval manuscript in the British Library that preserves one of the principal surviving copies of the Middle English poem "The Owl and the Nightingale."
- F. None of above.
PD
Predicate disambiguation
gpt-5-mini-2025-08-07
Target predicate: hasReferenceAccession Context triple: [Arabidopsis thaliana, hasReferenceAccession, Col-0]
-
A.
hasReferenceID
chosen
Indicates that an entity is associated with a specific reference identifier used to uniquely track or distinguish it.
-
B.
requiresForAccession
Indicates that one entity must be obtained, completed, or satisfied before another entity can be accessed, entered, or formally joined.
-
C.
EUAccession
Indicates that an entity becomes a member state of the European Union through the formal accession process.
-
D.
hasReferenceWork
Indicates that one entity is associated with a reference work (such as a dictionary, encyclopedia, or manual) that provides authoritative information about it.
-
E.
accessionType
Indicates the manner or category by which something is acquired, added, or admitted into a collection, system, or status.
- F. None of above.
Provenance (6 batches)
The batch behind each pipeline step, in order, with when it ran. Timestamps are batch-level — stages were processed in waves, so the object chain (NER → NED1 → NEDg → NED2) reads in order, but predicate / elicitation batches can sit in a different wave.
| Step | Stage | Batch ID | Status | When |
|---|---|---|---|---|
| creating | Elicitation | batch_69aed9626ebc8190a39de631788bea3e |
completed | March 9, 2026, 2:29 p.m. |
| NER | Named-entity recognition | batch_69af0321eee88190871c1d4bf44a5007 |
completed | March 9, 2026, 5:28 p.m. |
| NED1 | Entity disambiguation (via context triple) | batch_69b57f456bf88190b9b8678476ac3803 |
completed | March 14, 2026, 3:31 p.m. |
| NEDg | Description generation | batch_69b57fe89ed0819089d7e56568755b1c |
completed | March 14, 2026, 3:34 p.m. |
| NED2 | Entity disambiguation (via description) | batch_69b5805cb7e88190b2f6ed6a18de9319 |
completed | March 14, 2026, 3:35 p.m. |
| PD | Predicate disambiguation | batch_69af018dc90c8190a754b1bfbc802e80 |
completed | March 9, 2026, 5:21 p.m. |
Created at: March 9, 2026, 3:44 p.m.