Triple

T374610
Position Surface form Disambiguated ID Type / Status
Subject Karl Deisseroth E8342 entity
Predicate knownFor P22 FINISHED
Object CLARITY tissue-clearing method
CLARITY is a neuroscience technique that renders biological tissues transparent while preserving their molecular structure, enabling high-resolution, three-dimensional imaging of intact organs such as the brain.
E47391 NE FINISHED

How this triple was built (4 steps)

Every LLM step that produced this triple, in pipeline order — named-entity classification, the disambiguation choices (the exact options shown, with the pick highlighted), and the generated description. The batch + timestamp of each is in the Provenance table below.

NER Named-entity recognition gpt-5-mini
Instruction
Given a phrase, classify it is english named entity (e.g., persons, organizations, works of art) in Latin script, or not (e.g., literals, dates, URLs, verbose phrases). For disambiguation, the statement where the phrase occurs as object is also given. Please return a JSON object with `phrase` (string, the phrase being analyzed) and `is_ne` (boolean, indicating whether the phrase is a Named Entity).
Input
Phrase: CLARITY tissue-clearing method | Statement: [Karl Deisseroth, knownFor, CLARITY tissue-clearing method]
NED1 Entity disambiguation (via context triple) gpt-5-mini-2025-08-07
Target entity: CLARITY tissue-clearing method
Context triple: [Karl Deisseroth, knownFor, CLARITY tissue-clearing method]
  • A. Biomedical Optics Express
    Biomedical Optics Express is a peer-reviewed scientific journal focusing on research and developments in the field of biomedical optics and photonics.
  • B. Molecular Biology of the Cell
    Molecular Biology of the Cell is a leading peer-reviewed scientific journal that publishes research and reviews in cell biology and related molecular life sciences.
  • C. Fresnel zone plates
    Fresnel zone plates are diffractive optical elements composed of concentric rings that focus light through interference rather than refraction, serving as lens alternatives in applications like X-ray and microscopy.
  • D. Blaschka Glass Models of Plants
    The Blaschka Glass Models of Plants are an extraordinary collection of scientifically accurate, hand-crafted glass botanical sculptures created in the late 19th and early 20th centuries by Leopold and Rudolf Blaschka.
  • E. Technical Corrections to the Bayh–Dole Act
    Technical Corrections to the Bayh–Dole Act is a legislative measure that refined and clarified the original Bayh–Dole Act’s provisions governing the ownership and commercialization of inventions arising from federally funded research.
  • F. None of above. chosen
  • G. Unsure - the case is ambiguous/there is not enough information to decide.
NEDg Description generation gpt-5.1
Instruction
Generate a one-sentence description of the target entity. 
You are given a context triple in the form (subject, predicate, object), where the object is the target entity. 
# Instructions
Use the triple to infer relevant information about the entity. Describe the entity based on what is most defining, well-known. 
Avoid repeating the information from the triple, unless really essential.
# Response Format
Return only the sentence: "Description: [one-sentence description of the target entity]"
Input
Entity: CLARITY tissue-clearing method
Triple: [Karl Deisseroth, knownFor, CLARITY tissue-clearing method]
Generated description
CLARITY is a neuroscience technique that renders biological tissues transparent while preserving their molecular structure, enabling high-resolution, three-dimensional imaging of intact organs such as the brain.
NED2 Entity disambiguation (via description) gpt-5-mini-2025-08-07
Target entity: CLARITY tissue-clearing method
Target entity description: CLARITY is a neuroscience technique that renders biological tissues transparent while preserving their molecular structure, enabling high-resolution, three-dimensional imaging of intact organs such as the brain.
  • A. Biomedical Optics Express
    Biomedical Optics Express is a peer-reviewed scientific journal focusing on research and developments in the field of biomedical optics and photonics.
  • B. Molecular Biology of the Cell
    Molecular Biology of the Cell is a leading peer-reviewed scientific journal that publishes research and reviews in cell biology and related molecular life sciences.
  • C. Fresnel zone plates
    Fresnel zone plates are diffractive optical elements composed of concentric rings that focus light through interference rather than refraction, serving as lens alternatives in applications like X-ray and microscopy.
  • D. Blaschka Glass Models of Plants
    The Blaschka Glass Models of Plants are an extraordinary collection of scientifically accurate, hand-crafted glass botanical sculptures created in the late 19th and early 20th centuries by Leopold and Rudolf Blaschka.
  • E. Technical Corrections to the Bayh–Dole Act
    Technical Corrections to the Bayh–Dole Act is a legislative measure that refined and clarified the original Bayh–Dole Act’s provisions governing the ownership and commercialization of inventions arising from federally funded research.
  • F. None of above. chosen

Provenance (5 batches)

The batch behind each pipeline step, in order, with when it ran. Timestamps are batch-level — stages were processed in waves, so the object chain (NER → NED1 → NEDg → NED2) reads in order, but predicate / elicitation batches can sit in a different wave.

Step Stage Batch ID Status When
creating Elicitation batch_69a2e7f2ec648190b42bc7db424f8109 completed Feb. 28, 2026, 1:04 p.m.
NER Named-entity recognition batch_69a2ec1585648190943f1c698e9b2d81 completed Feb. 28, 2026, 1:22 p.m.
NED1 Entity disambiguation (via context triple) batch_69a3f0aa7ac081908125aee0042c63cc completed March 1, 2026, 7:54 a.m.
NEDg Description generation batch_69a3f11956f88190aed9f3b7f51c0c37 completed March 1, 2026, 7:56 a.m.
NED2 Entity disambiguation (via description) batch_69a3f21217b881909817a693e8cd75f5 completed March 1, 2026, 8 a.m.
Created at: Feb. 28, 2026, 1:08 p.m.