Triple
T37450421
| Position | Surface form | Disambiguated ID | Type / Status |
|---|---|---|---|
| Subject | Methylococcus |
E930656
|
entity |
| Predicate | hasMetabolicPathway |
P27773
|
FINISHED |
| Object | ribulose monophosphate pathway |
—
|
LITERAL FINISHED |
How this triple was built (2 steps)
Every LLM step that produced this triple, in pipeline order — named-entity classification, the disambiguation choices (the exact options shown, with the pick highlighted), and the generated description. The batch + timestamp of each is in the Provenance table below.
NER
Named-entity recognition
gpt-5-mini
Instruction
Given a phrase, classify it is english named entity (e.g., persons, organizations, works of art) in Latin script, or not (e.g., literals, dates, URLs, verbose phrases). For disambiguation, the statement where the phrase occurs as object is also given. Please return a JSON object with `phrase` (string, the phrase being analyzed) and `is_ne` (boolean, indicating whether the phrase is a Named Entity).
Input
Phrase: ribulose monophosphate pathway | Statement: [Methylococcus, hasMetabolicPathway, ribulose monophosphate pathway]
PD
Predicate disambiguation
gpt-5-mini-2025-08-07
Target predicate: hasMetabolicPathway Context triple: [Methylococcus, hasMetabolicPathway, ribulose monophosphate pathway]
-
A.
hasPathway
chosen
Indicates that there exists a route, channel, or sequence of steps through which one entity leads, connects, or gives access to another.
-
B.
hasActiveMetabolite
Indicates that a substance produces one or more metabolites that remain pharmacologically active in the body.
-
C.
biosyntheticPathway
Indicates that one entity is involved in the biochemical process or sequence of reactions that produces another entity.
-
D.
regulatoryPathway
Indicates that one entity is part of, or participates in, a biological or organizational regulatory pathway that controls the activity, expression, or behavior of another.
-
E.
isMetabolizedBy
Indicates that a substance is biochemically broken down or transformed through metabolic processes carried out by a specified organism, cell type, or enzyme system.
- F. None of above.
Provenance (3 batches)
The batch behind each pipeline step, in order, with when it ran. Timestamps are batch-level — stages were processed in waves, so the object chain (NER → NED1 → NEDg → NED2) reads in order, but predicate / elicitation batches can sit in a different wave.
| Step | Stage | Batch ID | Status | When |
|---|---|---|---|---|
| creating | Elicitation | batch_69f76ec0b9488190b7a4fae632bd1d2f |
completed | May 3, 2026, 3:50 p.m. |
| NER | Named-entity recognition | batch_69ff90b673248190b4dda9e005642d17 |
completed | May 9, 2026, 7:53 p.m. |
| PD | Predicate disambiguation | batch_69ff8d5bee1081909274052945e98a6f |
completed | May 9, 2026, 7:39 p.m. |
Created at: May 3, 2026, 4:17 p.m.