Triple
T34649664
| Position | Surface form | Disambiguated ID | Type / Status |
|---|---|---|---|
| Subject | enteroaggregative Escherichia coli |
E889799
|
entity |
| Predicate | colonizationSite |
P179566
|
FINISHED |
| Object | intestinalMucosa |
—
|
LITERAL FINISHED |
How this triple was built (2 steps)
Every LLM step that produced this triple, in pipeline order — named-entity classification, the disambiguation choices (the exact options shown, with the pick highlighted), and the generated description. The batch + timestamp of each is in the Provenance table below.
NER
Named-entity recognition
gpt-5-mini
Instruction
Given a phrase, classify it is english named entity (e.g., persons, organizations, works of art) in Latin script, or not (e.g., literals, dates, URLs, verbose phrases). For disambiguation, the statement where the phrase occurs as object is also given. Please return a JSON object with `phrase` (string, the phrase being analyzed) and `is_ne` (boolean, indicating whether the phrase is a Named Entity).
Input
Phrase: intestinalMucosa | Statement: [enteroaggregative Escherichia coli, colonizationSite, intestinalMucosa]
PD
Predicate disambiguation
gpt-5-mini-2025-08-07
Target predicate: colonizationSite Context triple: [enteroaggregative Escherichia coli, colonizationSite, intestinalMucosa]
-
A.
colonizationStage
Indicates the phase or level of progress an entity has reached within a broader colonization or settlement process.
-
B.
colonizes
Indicates that one entity establishes control or settlement over another entity’s territory or domain, often imposing its presence, systems, or influence there.
-
C.
treatsAnatomicalSite
Indicates that an action, intervention, or agent is directed toward and intended to treat a specific anatomical site.
-
D.
primarySites
Indicates the main or originating locations associated with an entity, often distinguishing them from secondary or related sites.
-
E.
specialistSiteOf
Indicates that one entity is a specialized facility, location, or site dedicated to serving, supporting, or focusing on the other entity.
- F. None of above. chosen
Provenance (4 batches)
The batch behind each pipeline step, in order, with when it ran. Timestamps are batch-level — stages were processed in waves, so the object chain (NER → NED1 → NEDg → NED2) reads in order, but predicate / elicitation batches can sit in a different wave.
| Step | Stage | Batch ID | Status | When |
|---|---|---|---|---|
| creating | Elicitation | batch_69f349d825c88190bfc6170ac9281260 |
completed | April 30, 2026, 12:23 p.m. |
| NER | Named-entity recognition | batch_69f722c1bc648190a79bfdc722dcaaa4 |
completed | May 3, 2026, 10:26 a.m. |
| PD | Predicate disambiguation | batch_69f72157af108190880317a62e634bb0 |
completed | May 3, 2026, 10:20 a.m. |
| PDg | Predicate description generation | batch_69f7221bc57c819085c1464a45e61b2f |
completed | May 3, 2026, 10:23 a.m. |
Created at: May 1, 2026, 2:04 a.m.