Triple
T3245631
| Position | Surface form | Disambiguated ID | Type / Status |
|---|---|---|---|
| Subject | Thomas rules for multistationarity and oscillations |
E68060
|
entity |
| Predicate | field |
P3
|
FINISHED |
| Object | systems biology |
E160238
|
NE FINISHED |
How this triple was built (2 steps)
Every LLM step that produced this triple, in pipeline order — named-entity classification, the disambiguation choices (the exact options shown, with the pick highlighted), and the generated description. The batch + timestamp of each is in the Provenance table below.
NER
Named-entity recognition
gpt-5-mini
Instruction
Given a phrase, classify it is english named entity (e.g., persons, organizations, works of art) in Latin script, or not (e.g., literals, dates, URLs, verbose phrases). For disambiguation, the statement where the phrase occurs as object is also given. Please return a JSON object with `phrase` (string, the phrase being analyzed) and `is_ne` (boolean, indicating whether the phrase is a Named Entity).
Input
Phrase: systems biology | Statement: [Thomas rules for multistationarity and oscillations, field, systems biology]
NED1
Entity disambiguation (via context triple)
gpt-5-mini-2025-08-07
Target entity: systems biology Context triple: [Thomas rules for multistationarity and oscillations, field, systems biology]
-
A.
Thomas logical formalism for regulatory networks
Thomas logical formalism for regulatory networks is a qualitative mathematical framework that models gene and regulatory networks using discrete logical variables and rules to capture their dynamic behavior.
-
B.
Thomas rules for multistationarity and oscillations
Thomas rules for multistationarity and oscillations are qualitative criteria in the theory of gene regulatory networks that relate the presence of positive and negative feedback circuits to the possibility of multiple stable states and sustained oscillatory behavior.
-
C.
Chemical and Physical Foundations of Biological Systems
Chemical and Physical Foundations of Biological Systems is a section of the MCAT that tests understanding of basic chemistry, physics, and related sciences as they apply to biological and medical contexts.
-
D.
Biological and Biochemical Foundations of Living Systems
Biological and Biochemical Foundations of Living Systems is an MCAT exam section that tests understanding of biology and biochemistry concepts as they relate to the processes and functions of living organisms.
-
E.
Harvard Center for Systems Biology
chosen
The Harvard Center for Systems Biology is a research center at Harvard University that integrates biology, mathematics, engineering, and computational science to study complex biological systems.
- F. None of above.
- G. Unsure - the case is ambiguous/there is not enough information to decide.
Provenance (3 batches)
The batch behind each pipeline step, in order, with when it ran. Timestamps are batch-level — stages were processed in waves, so the object chain (NER → NED1 → NEDg → NED2) reads in order, but predicate / elicitation batches can sit in a different wave.
| Step | Stage | Batch ID | Status | When |
|---|---|---|---|---|
| creating | Elicitation | batch_69ad858e4c708190aa31d486cfee8a6a |
completed | March 8, 2026, 2:19 p.m. |
| NER | Named-entity recognition | batch_69adaf1a96148190b63bf46209712707 |
completed | March 8, 2026, 5:17 p.m. |
| NED1 | Entity disambiguation (via context triple) | batch_69b2775f76988190bfaaaabce63f6f6b |
completed | March 12, 2026, 8:20 a.m. |
Created at: March 8, 2026, 3:09 p.m.