Triple
T29019587
| Position | Surface form | Disambiguated ID | Type / Status |
|---|---|---|---|
| Subject | Nucleariida |
E737414
|
entity |
| Predicate | geneticMarkerUsed |
P90099
|
FINISHED |
| Object | small subunit rRNA gene |
—
|
LITERAL FINISHED |
How this triple was built (2 steps)
Every LLM step that produced this triple, in pipeline order — named-entity classification, the disambiguation choices (the exact options shown, with the pick highlighted), and the generated description. The batch + timestamp of each is in the Provenance table below.
NER
Named-entity recognition
gpt-5-mini
Instruction
Given a phrase, classify it is english named entity (e.g., persons, organizations, works of art) in Latin script, or not (e.g., literals, dates, URLs, verbose phrases). For disambiguation, the statement where the phrase occurs as object is also given. Please return a JSON object with `phrase` (string, the phrase being analyzed) and `is_ne` (boolean, indicating whether the phrase is a Named Entity).
Input
Phrase: small subunit rRNA gene | Statement: [Nucleariida, geneticMarkerUsed, small subunit rRNA gene]
PD
Predicate disambiguation
gpt-5-mini-2025-08-07
Target predicate: geneticMarkerUsed Context triple: [Nucleariida, geneticMarkerUsed, small subunit rRNA gene]
-
A.
geneticStatus
Indicates the genetic condition or variant state an entity has in relation to a specific gene or set of genes.
-
B.
hasGeneticLocus
Indicates that a genetic feature or trait is located at, or associated with, a specific position (locus) on a genome or chromosome.
-
C.
usedAsReferenceAlleleInResearch
Indicates that an entity serves as the baseline or control allele against which other alleles are compared in a research study.
-
D.
usedAsBiomarkerFor
chosen
Indicates that one entity serves as a biomarker for another entity, typically signaling the presence, progression, or risk of a specific condition or biological state.
-
E.
geneticAssociation
Indicates that there is a statistically supported relationship between a genetic factor (e.g., variant, gene) and a particular trait, condition, or phenotype.
- F. None of above.
Provenance (3 batches)
The batch behind each pipeline step, in order, with when it ran. Timestamps are batch-level — stages were processed in waves, so the object chain (NER → NED1 → NEDg → NED2) reads in order, but predicate / elicitation batches can sit in a different wave.
| Step | Stage | Batch ID | Status | When |
|---|---|---|---|---|
| creating | Elicitation | batch_69f077ee19f881909af48f9cab00a2e5 |
completed | April 28, 2026, 9:03 a.m. |
| NER | Named-entity recognition | batch_69f6617ba4a88190bfc5c305acb4f93f |
completed | May 2, 2026, 8:41 p.m. |
| PD | Predicate disambiguation | batch_69f660f082508190a95a7888ad66cb2e |
completed | May 2, 2026, 8:39 p.m. |
Created at: April 28, 2026, 9:48 a.m.