Triple
T28695080
| Position | Surface form | Disambiguated ID | Type / Status |
|---|---|---|---|
| Subject | Wolinella succinogenes |
E729390
|
entity |
| Predicate | metabolicProduct |
P67838
|
FINISHED |
| Object | succinate |
—
|
LITERAL FINISHED |
How this triple was built (2 steps)
Every LLM step that produced this triple, in pipeline order — named-entity classification, the disambiguation choices (the exact options shown, with the pick highlighted), and the generated description. The batch + timestamp of each is in the Provenance table below.
NER
Named-entity recognition
gpt-5-mini
Instruction
Given a phrase, classify it is english named entity (e.g., persons, organizations, works of art) in Latin script, or not (e.g., literals, dates, URLs, verbose phrases). For disambiguation, the statement where the phrase occurs as object is also given. Please return a JSON object with `phrase` (string, the phrase being analyzed) and `is_ne` (boolean, indicating whether the phrase is a Named Entity).
Input
Phrase: succinate | Statement: [Wolinella succinogenes, metabolicProduct, succinate]
PD
Predicate disambiguation
gpt-5-mini-2025-08-07
Target predicate: metabolicProduct Context triple: [Wolinella succinogenes, metabolicProduct, succinate]
-
A.
isMetabolizedBy
Indicates that a substance is biochemically broken down or transformed through metabolic processes carried out by a specified organism, cell type, or enzyme system.
-
B.
primaryMetabolite
Indicates that one entity is a primary metabolite, i.e., a small molecule directly involved in essential cellular metabolic processes.
-
C.
chemicalTypeProduced
chosen
Indicates that a process, reaction, or entity results in the production of a specific type or class of chemical.
-
D.
isBiosynthesizedFrom
Indicates that one substance is produced through a biological synthesis process using another substance as its precursor or starting material.
-
E.
proteinProduct
Indicates that one entity is the protein that is produced or encoded by another entity (such as a gene or transcript).
- F. None of above.
Provenance (3 batches)
The batch behind each pipeline step, in order, with when it ran. Timestamps are batch-level — stages were processed in waves, so the object chain (NER → NED1 → NEDg → NED2) reads in order, but predicate / elicitation batches can sit in a different wave.
| Step | Stage | Batch ID | Status | When |
|---|---|---|---|---|
| creating | Elicitation | batch_69f043e60b6c8190ac2cd042e77fe6e9 |
completed | April 28, 2026, 5:21 a.m. |
| NER | Named-entity recognition | batch_69f656ad826c8190a0ac00b608d40467 |
completed | May 2, 2026, 7:55 p.m. |
| PD | Predicate disambiguation | batch_69f651ac855481908e30c3b345d31356 |
completed | May 2, 2026, 7:34 p.m. |
Created at: April 28, 2026, 5:38 a.m.