Triple
T2508976
| Position | Surface form | Disambiguated ID | Type / Status |
|---|---|---|---|
| Subject | Vibrio cholerae |
E52655
|
entity |
| Predicate | GramStain |
P31416
|
FINISHED |
| Object | Gram-negative |
—
|
LITERAL FINISHED |
How this triple was built (2 steps)
Every LLM step that produced this triple, in pipeline order — named-entity classification, the disambiguation choices (the exact options shown, with the pick highlighted), and the generated description. The batch + timestamp of each is in the Provenance table below.
NER
Named-entity recognition
gpt-5-mini
Instruction
Given a phrase, classify it is english named entity (e.g., persons, organizations, works of art) in Latin script, or not (e.g., literals, dates, URLs, verbose phrases). For disambiguation, the statement where the phrase occurs as object is also given. Please return a JSON object with `phrase` (string, the phrase being analyzed) and `is_ne` (boolean, indicating whether the phrase is a Named Entity).
Input
Phrase: Gram-negative | Statement: [Vibrio cholerae, GramStain, Gram-negative]
PD
Predicate disambiguation
gpt-5-mini-2025-08-07
Target predicate: GramStain Context triple: [Vibrio cholerae, GramStain, Gram-negative]
-
A.
gramStain
chosen
Indicates the result of a Gram staining procedure, specifying how an organism or sample reacts to the Gram stain (e.g., Gram-positive or Gram-negative).
-
B.
pathogenGenus
Indicates that one entity is a pathogen belonging to, or classified under, the specified genus.
-
C.
guthrieClassification
Indicates a categorization relationship where an entity is assigned a class or type according to the Guthrie classification system.
-
D.
pathogenType
Indicates the specific kind or category of pathogen associated with or responsible for an entity or condition.
-
E.
laboratoryModule
Indicates a relationship where an entity is a laboratory module or functions as a lab-specific component or unit within a larger system or structure.
- F. None of above.
Provenance (3 batches)
The batch behind each pipeline step, in order, with when it ran. Timestamps are batch-level — stages were processed in waves, so the object chain (NER → NED1 → NEDg → NED2) reads in order, but predicate / elicitation batches can sit in a different wave.
| Step | Stage | Batch ID | Status | When |
|---|---|---|---|---|
| creating | Elicitation | batch_69ab4958e76481908a235377dd921c9e |
completed | March 6, 2026, 9:38 p.m. |
| NER | Named-entity recognition | batch_69abd65d6a988190aaaac8e98540a14f |
completed | March 7, 2026, 7:40 a.m. |
| PD | Predicate disambiguation | batch_69abd0bd996c8190ba8b9d6e4333b8d4 |
completed | March 7, 2026, 7:16 a.m. |
Created at: March 6, 2026, 9:46 p.m.