Triple
T2504205
| Position | Surface form | Disambiguated ID | Type / Status |
|---|---|---|---|
| Subject | Bacillus anthracis |
E52538
|
entity |
| Predicate | plasmid |
P12470
|
FINISHED |
| Object | pXO1 |
—
|
LITERAL FINISHED |
How this triple was built (2 steps)
Every LLM step that produced this triple, in pipeline order — named-entity classification, the disambiguation choices (the exact options shown, with the pick highlighted), and the generated description. The batch + timestamp of each is in the Provenance table below.
NER
Named-entity recognition
gpt-5-mini
Instruction
Given a phrase, classify it is english named entity (e.g., persons, organizations, works of art) in Latin script, or not (e.g., literals, dates, URLs, verbose phrases). For disambiguation, the statement where the phrase occurs as object is also given. Please return a JSON object with `phrase` (string, the phrase being analyzed) and `is_ne` (boolean, indicating whether the phrase is a Named Entity).
Input
Phrase: pXO1 | Statement: [Bacillus anthracis, plasmid, pXO1]
PD
Predicate disambiguation
gpt-5-mini-2025-08-07
Target predicate: plasmid Context triple: [Bacillus anthracis, plasmid, pXO1]
-
A.
plasmids
chosen
Indicates that one entity is a plasmid that carries or is associated with genetic material related to the other entity.
-
B.
geneticMaterial
Indicates that one entity serves as the hereditary or genetic substance (e.g., DNA or RNA) of another entity.
-
C.
geneticMaterialOrganization
Indicates how genetic material is structured, arranged, or organized within or among biological entities.
-
D.
geneticExchange
Indicates the transfer or sharing of genetic material between entities, resulting in altered or recombined genetic information.
-
E.
antigen
Indicates that one entity functions as an antigen in relation to another, typically provoking or being recognized by an immune response.
- F. None of above.
Provenance (3 batches)
The batch behind each pipeline step, in order, with when it ran. Timestamps are batch-level — stages were processed in waves, so the object chain (NER → NED1 → NEDg → NED2) reads in order, but predicate / elicitation batches can sit in a different wave.
| Step | Stage | Batch ID | Status | When |
|---|---|---|---|---|
| creating | Elicitation | batch_69ab4957b3a88190adf968ae0c1b931c |
completed | March 6, 2026, 9:38 p.m. |
| NER | Named-entity recognition | batch_69abd1cd2db0819087d21ec49ffd9585 |
completed | March 7, 2026, 7:20 a.m. |
| PD | Predicate disambiguation | batch_69abd0bba5348190bb4637d3165cb339 |
completed | March 7, 2026, 7:16 a.m. |
Created at: March 6, 2026, 9:46 p.m.