Triple
T23466631
| Position | Surface form | Disambiguated ID | Type / Status |
|---|---|---|---|
| Subject | Entrez |
E569116
|
entity |
| Predicate | hasComponent |
P35
|
FINISHED |
| Object | Entrez Programming Utilities |
—
|
NE NERFINISHED |
How this triple was built (2 steps)
Every LLM step that produced this triple, in pipeline order — named-entity classification, the disambiguation choices (the exact options shown, with the pick highlighted), and the generated description. The batch + timestamp of each is in the Provenance table below.
NER
Named-entity recognition
gpt-5-mini
Instruction
Given a phrase, classify it is english named entity (e.g., persons, organizations, works of art) in Latin script, or not (e.g., literals, dates, URLs, verbose phrases). For disambiguation, the statement where the phrase occurs as object is also given. Please return a JSON object with `phrase` (string, the phrase being analyzed) and `is_ne` (boolean, indicating whether the phrase is a Named Entity).
Input
Phrase: Entrez Programming Utilities | Statement: [Entrez, hasComponent, Entrez Programming Utilities]
NED1
Entity disambiguation (via context triple)
gpt-5-mini-2025-08-07
Target entity: Entrez Programming Utilities Context triple: [Entrez, hasComponent, Entrez Programming Utilities]
-
A.
NCBI E-utilities API
chosen
The NCBI E-utilities API is a set of programmatic web services that allow automated querying, retrieval, and integration of data from NCBI databases such as PubMed.
-
B.
Entrez system
The Entrez system is an integrated search and retrieval platform from the National Center for Biotechnology Information (NCBI) that provides unified access to a wide range of biomedical databases, including literature, sequences, genomes, and more.
-
C.
Entrez
Entrez is an integrated, text-based search and retrieval system developed by the NCBI for accessing a wide range of biomedical and genomic databases.
-
D.
Protein Information Resource
Protein Information Resource is a bioinformatics resource center that curates, annotates, and provides access to comprehensive protein sequence and functional information for the scientific community.
-
E.
BLAST
BLAST is a widely used bioinformatics tool for comparing biological sequences, such as DNA, RNA, or proteins, to sequence databases to identify similarities and infer functional or evolutionary relationships.
- F. None of above.
- G. Unsure - the case is ambiguous/there is not enough information to decide.
Provenance (2 batches)
The batch behind each pipeline step, in order, with when it ran. Timestamps are batch-level — stages were processed in waves, so the object chain (NER → NED1 → NEDg → NED2) reads in order, but predicate / elicitation batches can sit in a different wave.
| Step | Stage | Batch ID | Status | When |
|---|---|---|---|---|
| creating | Elicitation | batch_69e2458ebd808190b3298163132cfb0b |
completed | April 17, 2026, 2:37 p.m. |
| NER | Named-entity recognition | batch_69f1a6fc35c48190a67614fb4170f15b |
completed | April 29, 2026, 6:36 a.m. |
Created at: April 17, 2026, 5:54 p.m.