Triple
T23466553
| Position | Surface form | Disambiguated ID | Type / Status |
|---|---|---|---|
| Subject | BLAST |
E569115
|
entity |
| Predicate | MEGABLASTFor |
P106054
|
FINISHED |
| Object | highly similar nucleotide sequences |
—
|
LITERAL FINISHED |
How this triple was built (2 steps)
Every LLM step that produced this triple, in pipeline order — named-entity classification, the disambiguation choices (the exact options shown, with the pick highlighted), and the generated description. The batch + timestamp of each is in the Provenance table below.
NER
Named-entity recognition
gpt-5-mini
Instruction
Given a phrase, classify it is english named entity (e.g., persons, organizations, works of art) in Latin script, or not (e.g., literals, dates, URLs, verbose phrases). For disambiguation, the statement where the phrase occurs as object is also given. Please return a JSON object with `phrase` (string, the phrase being analyzed) and `is_ne` (boolean, indicating whether the phrase is a Named Entity).
Input
Phrase: highly similar nucleotide sequences | Statement: [BLAST, MEGABLASTFor, highly similar nucleotide sequences]
PD
Predicate disambiguation
gpt-5-mini-2025-08-07
Target predicate: MEGABLASTFor Context triple: [BLAST, MEGABLASTFor, highly similar nucleotide sequences]
-
A.
bindsSequenceMotif
Indicates that one entity specifically recognizes and attaches to a particular sequence motif of another entity.
-
B.
homologousTo
Indicates that two entities share a common evolutionary origin or structural similarity, often implying they derive from the same ancestral feature.
-
C.
paralogOf
Indicates that two genes or proteins are evolutionarily related as paralogs, having arisen from a duplication event within the same genome.
-
D.
hasOrthologsWith
Indicates that two genes or proteins in different species are orthologous, meaning they originated from a common ancestral gene and typically retain similar functions.
-
E.
followsMoreLocalAlignmentThan
chosen
Indicates that one entity adheres to a more locally focused or fine-grained alignment strategy or standard than another entity.
- F. None of above.
Provenance (3 batches)
The batch behind each pipeline step, in order, with when it ran. Timestamps are batch-level — stages were processed in waves, so the object chain (NER → NED1 → NEDg → NED2) reads in order, but predicate / elicitation batches can sit in a different wave.
| Step | Stage | Batch ID | Status | When |
|---|---|---|---|---|
| creating | Elicitation | batch_69e2458ebd808190b3298163132cfb0b |
completed | April 17, 2026, 2:37 p.m. |
| NER | Named-entity recognition | batch_69f1a6faaf8c8190b4fd191c54e1acea |
completed | April 29, 2026, 6:36 a.m. |
| PD | Predicate disambiguation | batch_69f06201d33481909b5fd7b92d03e658 |
completed | April 28, 2026, 7:30 a.m. |
Created at: April 17, 2026, 5:54 p.m.