Triple
T23466497
| Position | Surface form | Disambiguated ID | Type / Status |
|---|---|---|---|
| Subject | dbVar |
E569114
|
entity |
| Predicate | integratedWith |
P2830
|
FINISHED |
| Object | ClinVar |
—
|
NE NERFINISHED |
How this triple was built (2 steps)
Every LLM step that produced this triple, in pipeline order — named-entity classification, the disambiguation choices (the exact options shown, with the pick highlighted), and the generated description. The batch + timestamp of each is in the Provenance table below.
NER
Named-entity recognition
gpt-5-mini
Instruction
Given a phrase, classify it is english named entity (e.g., persons, organizations, works of art) in Latin script, or not (e.g., literals, dates, URLs, verbose phrases). For disambiguation, the statement where the phrase occurs as object is also given. Please return a JSON object with `phrase` (string, the phrase being analyzed) and `is_ne` (boolean, indicating whether the phrase is a Named Entity).
Input
Phrase: ClinVar | Statement: [dbVar, integratedWith, ClinVar]
NED1
Entity disambiguation (via context triple)
gpt-5-mini-2025-08-07
Target entity: ClinVar Context triple: [dbVar, integratedWith, ClinVar]
-
A.
ClinVar database
chosen
The ClinVar database is a public archive that aggregates information about the clinical significance of genetic variants and their relationships to human health.
-
B.
Genetic Testing Registry
The Genetic Testing Registry is an NIH-maintained public resource that provides detailed information about genetic tests, their purposes, methodologies, and associated conditions.
-
C.
NCBI MedGen database
The NCBI MedGen database is a curated resource that aggregates information on human medical genetics, including diseases, phenotypes, and related genomic data, to support clinical and research applications.
-
D.
Diagnostics and Genomics
Diagnostics and Genomics is a business segment focused on providing advanced tools and solutions for molecular diagnostics, genetic analysis, and related clinical and research applications.
-
E.
Veritas Genetics
Veritas Genetics is a biotechnology company that offers whole-genome sequencing and interpretation services for consumers and clinicians.
- F. None of above.
- G. Unsure - the case is ambiguous/there is not enough information to decide.
Provenance (2 batches)
The batch behind each pipeline step, in order, with when it ran. Timestamps are batch-level — stages were processed in waves, so the object chain (NER → NED1 → NEDg → NED2) reads in order, but predicate / elicitation batches can sit in a different wave.
| Step | Stage | Batch ID | Status | When |
|---|---|---|---|---|
| creating | Elicitation | batch_69e2458ebd808190b3298163132cfb0b |
completed | April 17, 2026, 2:37 p.m. |
| NER | Named-entity recognition | batch_69f1a6faaf8c8190b4fd191c54e1acea |
completed | April 29, 2026, 6:36 a.m. |
Created at: April 17, 2026, 5:54 p.m.