Triple

T23466487
Position Surface form Disambiguated ID Type / Status
Subject dbVar E569114 entity
Predicate partOf P40 FINISHED
Object NCBI Entrez system NE NERFINISHED

How this triple was built (2 steps)

Every LLM step that produced this triple, in pipeline order — named-entity classification, the disambiguation choices (the exact options shown, with the pick highlighted), and the generated description. The batch + timestamp of each is in the Provenance table below.

NER Named-entity recognition gpt-5-mini
Instruction
Given a phrase, classify it is english named entity (e.g., persons, organizations, works of art) in Latin script, or not (e.g., literals, dates, URLs, verbose phrases). For disambiguation, the statement where the phrase occurs as object is also given. Please return a JSON object with `phrase` (string, the phrase being analyzed) and `is_ne` (boolean, indicating whether the phrase is a Named Entity).
Input
Phrase: NCBI Entrez system | Statement: [dbVar, partOf, NCBI Entrez system]
NED1 Entity disambiguation (via context triple) gpt-5-mini-2025-08-07
Target entity: NCBI Entrez system
Context triple: [dbVar, partOf, NCBI Entrez system]
  • A. NCBI E-utilities API
    The NCBI E-utilities API is a set of programmatic web services that allow automated querying, retrieval, and integration of data from NCBI databases such as PubMed.
  • B. NCBI databases
    NCBI databases are a collection of publicly accessible biological data resources, including nucleotide and protein sequences, genomes, and literature, maintained by the U.S. National Center for Biotechnology Information.
  • C. National Center for Biotechnology Information
    The National Center for Biotechnology Information (NCBI) is a U.S. government bioinformatics institution that develops and hosts major biological databases and tools for biomedical research.
  • D. Entrez system chosen
    The Entrez system is an integrated search and retrieval platform from the National Center for Biotechnology Information (NCBI) that provides unified access to a wide range of biomedical databases, including literature, sequences, genomes, and more.
  • E. International Nucleotide Sequence Database Collaboration
    The International Nucleotide Sequence Database Collaboration is a global partnership among major public nucleotide sequence databases that coordinates the collection, standardization, and free exchange of DNA and RNA sequence data worldwide.
  • F. None of above.
  • G. Unsure - the case is ambiguous/there is not enough information to decide.

Provenance (2 batches)

The batch behind each pipeline step, in order, with when it ran. Timestamps are batch-level — stages were processed in waves, so the object chain (NER → NED1 → NEDg → NED2) reads in order, but predicate / elicitation batches can sit in a different wave.

Step Stage Batch ID Status When
creating Elicitation batch_69e2458ebd808190b3298163132cfb0b completed April 17, 2026, 2:37 p.m.
NER Named-entity recognition batch_69f1a6faaf8c8190b4fd191c54e1acea completed April 29, 2026, 6:36 a.m.
Created at: April 17, 2026, 5:54 p.m.