Triple
T22931980
| Position | Surface form | Disambiguated ID | Type / Status |
|---|---|---|---|
| Subject | GTR Tests database |
E569465
|
entity |
| Predicate | linkedTo |
P37
|
FINISHED |
| Object | NCBI ClinVar database |
—
|
NE NERFINISHED |
How this triple was built (2 steps)
Every LLM step that produced this triple, in pipeline order — named-entity classification, the disambiguation choices (the exact options shown, with the pick highlighted), and the generated description. The batch + timestamp of each is in the Provenance table below.
NER
Named-entity recognition
gpt-5-mini
Instruction
Given a phrase, classify it is english named entity (e.g., persons, organizations, works of art) in Latin script, or not (e.g., literals, dates, URLs, verbose phrases). For disambiguation, the statement where the phrase occurs as object is also given. Please return a JSON object with `phrase` (string, the phrase being analyzed) and `is_ne` (boolean, indicating whether the phrase is a Named Entity).
Input
Phrase: NCBI ClinVar database | Statement: [GTR Tests database, linkedTo, NCBI ClinVar database]
NED1
Entity disambiguation (via context triple)
gpt-5-mini-2025-08-07
Target entity: NCBI ClinVar database Context triple: [GTR Tests database, linkedTo, NCBI ClinVar database]
-
A.
ClinVar database
chosen
The ClinVar database is a public archive that aggregates information about the clinical significance of genetic variants and their relationships to human health.
-
B.
Ensembl
Ensembl is a comprehensive genome annotation and browsing platform that provides detailed, regularly updated genomic data for a wide range of species.
-
C.
National Center for Biotechnology Information
The National Center for Biotechnology Information (NCBI) is a U.S. government bioinformatics institution that develops and hosts major biological databases and tools for biomedical research.
-
D.
23andMe
23andMe is a personal genomics and biotechnology company best known for providing direct-to-consumer DNA testing and ancestry analysis services.
-
E.
inHerit online database
The inHerit online database is Western Australia’s official public portal for information on heritage-listed places, providing detailed records, histories, and statutory information about sites on the State Register of Heritage Places.
- F. None of above.
- G. Unsure - the case is ambiguous/there is not enough information to decide.
Provenance (2 batches)
The batch behind each pipeline step, in order, with when it ran. Timestamps are batch-level — stages were processed in waves, so the object chain (NER → NED1 → NEDg → NED2) reads in order, but predicate / elicitation batches can sit in a different wave.
| Step | Stage | Batch ID | Status | When |
|---|---|---|---|---|
| creating | Elicitation | batch_69e2458f7d008190901dccbaebeaba24 |
completed | April 17, 2026, 2:37 p.m. |
| NER | Named-entity recognition | batch_69f1813260608190bb9e1ca704c7e12f |
completed | April 29, 2026, 3:55 a.m. |
Created at: April 17, 2026, 3:44 p.m.