Triple
T22693340
| Position | Surface form | Disambiguated ID | Type / Status |
|---|---|---|---|
| Subject | C9orf72 |
E561105
|
entity |
| Predicate | associatedWithBiologicalProcess |
P35137
|
FINISHED |
| Object | autophagy |
—
|
LITERAL FINISHED |
How this triple was built (2 steps)
Every LLM step that produced this triple, in pipeline order — named-entity classification, the disambiguation choices (the exact options shown, with the pick highlighted), and the generated description. The batch + timestamp of each is in the Provenance table below.
NER
Named-entity recognition
gpt-5-mini
Instruction
Given a phrase, classify it is english named entity (e.g., persons, organizations, works of art) in Latin script, or not (e.g., literals, dates, URLs, verbose phrases). For disambiguation, the statement where the phrase occurs as object is also given. Please return a JSON object with `phrase` (string, the phrase being analyzed) and `is_ne` (boolean, indicating whether the phrase is a Named Entity).
Input
Phrase: autophagy | Statement: [C9orf72, associatedWithBiologicalProcess, autophagy]
PD
Predicate disambiguation
gpt-5-mini-2025-08-07
Target predicate: associatedWithBiologicalProcess Context triple: [C9orf72, associatedWithBiologicalProcess, autophagy]
-
A.
affectsBiologicalProcess
Indicates a relationship where one entity produces a change or influence on a biological process of another entity or system.
-
B.
hasBiologicalBasisIn
Indicates that one entity is grounded in, caused by, or dependent on the biological properties, processes, or mechanisms of another entity.
-
C.
hasBiologicalComponents
Indicates that an entity is composed of, contains, or is associated with one or more biological parts or substances.
-
D.
overexpressionAssociatedWith
Indicates that an unusually high level of expression of one entity (such as a gene or protein) is associated with the presence, severity, or outcome of another entity or condition.
-
E.
biologicalEvent
chosen
Indicates a relationship where an entity participates in, causes, or is affected by a process or occurrence in a biological system.
- F. None of above.
Provenance (3 batches)
The batch behind each pipeline step, in order, with when it ran. Timestamps are batch-level — stages were processed in waves, so the object chain (NER → NED1 → NEDg → NED2) reads in order, but predicate / elicitation batches can sit in a different wave.
| Step | Stage | Batch ID | Status | When |
|---|---|---|---|---|
| creating | Elicitation | batch_69e2454d71b48190a1f80af9f82b6fcf |
completed | April 17, 2026, 2:35 p.m. |
| NER | Named-entity recognition | batch_69f1789c6ae481908975b7d27e7624ac |
completed | April 29, 2026, 3:18 a.m. |
| PD | Predicate disambiguation | batch_69ee62b2259c819091ed1387a748b9f3 |
completed | April 26, 2026, 7:08 p.m. |
Created at: April 17, 2026, 3:13 p.m.