Triple
T22690631
| Position | Surface form | Disambiguated ID | Type / Status |
|---|---|---|---|
| Subject | Vitrakvi |
E561039
|
entity |
| Predicate | targetsGeneFusion |
P149283
|
FINISHED |
| Object | NTRK1 |
—
|
NE NERFINISHED |
How this triple was built (4 steps)
Every LLM step that produced this triple, in pipeline order — named-entity classification, the disambiguation choices (the exact options shown, with the pick highlighted), and the generated description. The batch + timestamp of each is in the Provenance table below.
NER
Named-entity recognition
gpt-5-mini
Instruction
Given a phrase, classify it is english named entity (e.g., persons, organizations, works of art) in Latin script, or not (e.g., literals, dates, URLs, verbose phrases). For disambiguation, the statement where the phrase occurs as object is also given. Please return a JSON object with `phrase` (string, the phrase being analyzed) and `is_ne` (boolean, indicating whether the phrase is a Named Entity).
Input
Phrase: NTRK1 | Statement: [Vitrakvi, targetsGeneFusion, NTRK1]
NED1
Entity disambiguation (via context triple)
gpt-5-mini-2025-08-07
Target entity: NTRK1 Context triple: [Vitrakvi, targetsGeneFusion, NTRK1]
-
A.
TRK
TRK is the FAA location identifier for Truckee Tahoe Airport, a public airport serving the Truckee and Lake Tahoe region in California.
-
B.
GRIN1
GRIN1 is a gene that encodes an essential subunit of NMDA-type glutamate receptors, which play a key role in synaptic transmission and plasticity in the central nervous system.
-
C.
Ephrin-B3
Ephrin-B3 is a transmembrane ligand of the Eph family of receptor tyrosine kinases that plays key roles in nervous system development and also serves as an entry receptor for certain henipaviruses.
-
D.
ERBB3
ERBB3 is a member of the ErbB family of receptor tyrosine kinases that plays a key role in cell signaling, particularly in cancer, often through potent mitogenic and survival pathways.
-
E.
ERBB4
ERBB4 is a receptor tyrosine kinase of the ErbB/EGFR family involved in cell signaling pathways that regulate cell growth, differentiation, and development.
- F. None of above. chosen
- G. Unsure - the case is ambiguous/there is not enough information to decide.
NED2
Entity disambiguation (via description)
gpt-5-mini-2025-08-07
Target entity: NTRK1 Target entity description: NTRK1 is a proto-oncogene encoding the TRKA receptor tyrosine kinase, which mediates nerve growth factor signaling and can drive cancer when involved in gene fusions.
-
A.
TRK
TRK is the FAA location identifier for Truckee Tahoe Airport, a public airport serving the Truckee and Lake Tahoe region in California.
-
B.
GRIN1
GRIN1 is a gene that encodes an essential subunit of NMDA-type glutamate receptors, which play a key role in synaptic transmission and plasticity in the central nervous system.
-
C.
Ephrin-B3
Ephrin-B3 is a transmembrane ligand of the Eph family of receptor tyrosine kinases that plays key roles in nervous system development and also serves as an entry receptor for certain henipaviruses.
-
D.
ERBB3
ERBB3 is a member of the ErbB family of receptor tyrosine kinases that plays a key role in cell signaling, particularly in cancer, often through potent mitogenic and survival pathways.
-
E.
ERBB4
ERBB4 is a receptor tyrosine kinase of the ErbB/EGFR family involved in cell signaling pathways that regulate cell growth, differentiation, and development.
- F. None of above. chosen
PD
Predicate disambiguation
gpt-5-mini-2025-08-07
Target predicate: targetsGeneFusion Context triple: [Vitrakvi, targetsGeneFusion, NTRK1]
-
A.
targetsGene
Indicates that one entity is directed toward, acts upon, or is intended to affect a specific gene.
-
B.
dominantFusionProcess
Indicates that one fusion process is the primary or prevailing mechanism compared to other possible fusion processes in a given context.
-
C.
genomicAlteration
Indicates a relationship where an entity has undergone a change or mutation in its genetic material compared to a reference genome.
-
D.
geneticallyLinkedTo
Indicates a relationship where two entities share a genetic connection, such as common ancestry, shared genes, or hereditary association.
-
E.
encodedByGene
Indicates that a particular gene is responsible for producing or specifying the sequence of a given molecule (such as a protein or RNA).
- F. None of above. chosen
Provenance (4 batches)
The batch behind each pipeline step, in order, with when it ran. Timestamps are batch-level — stages were processed in waves, so the object chain (NER → NED1 → NEDg → NED2) reads in order, but predicate / elicitation batches can sit in a different wave.
| Step | Stage | Batch ID | Status | When |
|---|---|---|---|---|
| creating | Elicitation | batch_69e2454d71b48190a1f80af9f82b6fcf |
completed | April 17, 2026, 2:35 p.m. |
| NER | Named-entity recognition | batch_69f1789a1fd08190bce5fa0babe695d3 |
completed | April 29, 2026, 3:18 a.m. |
| PD | Predicate disambiguation | batch_69ee62b2259c819091ed1387a748b9f3 |
completed | April 26, 2026, 7:08 p.m. |
| PDg | Predicate description generation | batch_69ee8843d3308190b6e22bb98ae5c3d8 |
completed | April 26, 2026, 9:48 p.m. |
Created at: April 17, 2026, 3:13 p.m.