Triple
T22661884
| Position | Surface form | Disambiguated ID | Type / Status |
|---|---|---|---|
| Subject | Saccharomycetales |
E559685
|
entity |
| Predicate | includes |
P1393
|
FINISHED |
| Object | Pichia pastoris |
—
|
NE NERFINISHED |
How this triple was built (3 steps)
Every LLM step that produced this triple, in pipeline order — named-entity classification, the disambiguation choices (the exact options shown, with the pick highlighted), and the generated description. The batch + timestamp of each is in the Provenance table below.
NER
Named-entity recognition
gpt-5-mini
Instruction
Given a phrase, classify it is english named entity (e.g., persons, organizations, works of art) in Latin script, or not (e.g., literals, dates, URLs, verbose phrases). For disambiguation, the statement where the phrase occurs as object is also given. Please return a JSON object with `phrase` (string, the phrase being analyzed) and `is_ne` (boolean, indicating whether the phrase is a Named Entity).
Input
Phrase: Pichia pastoris | Statement: [Saccharomycetales, includes, Pichia pastoris]
NED1
Entity disambiguation (via context triple)
gpt-5-mini-2025-08-07
Target entity: Pichia pastoris Context triple: [Saccharomycetales, includes, Pichia pastoris]
-
A.
Kluyveromyces lactis
Kluyveromyces lactis is a yeast species widely used in dairy fermentation and as a model organism for genetics and biotechnology research.
-
B.
Kluyveromyces marxianus
Kluyveromyces marxianus is a thermotolerant yeast species widely used in biotechnology for its rapid growth and ability to ferment a broad range of sugars, including lactose.
-
C.
Saccharomyces cerevisiae
Saccharomyces cerevisiae is a species of yeast widely used in baking, brewing, and scientific research as a model eukaryotic organism.
-
D.
Lachancea kluyveri
Lachancea kluyveri is a species of budding yeast used as a model organism in genetics and evolutionary biology, particularly for studying genome evolution and metabolic diversity.
-
E.
Saccharomyces bayanus
Saccharomyces bayanus is a species of yeast commonly used in winemaking and cider fermentation due to its tolerance to low temperatures and high alcohol levels.
- F. None of above. chosen
- G. Unsure - the case is ambiguous/there is not enough information to decide.
NED2
Entity disambiguation (via description)
gpt-5-mini-2025-08-07
Target entity: Pichia pastoris Target entity description: Pichia pastoris is a methylotrophic yeast widely used as a eukaryotic expression system for high-level production of recombinant proteins in biotechnology and research.
-
A.
Kluyveromyces lactis
Kluyveromyces lactis is a yeast species widely used in dairy fermentation and as a model organism for genetics and biotechnology research.
-
B.
Kluyveromyces marxianus
Kluyveromyces marxianus is a thermotolerant yeast species widely used in biotechnology for its rapid growth and ability to ferment a broad range of sugars, including lactose.
-
C.
Saccharomyces cerevisiae
Saccharomyces cerevisiae is a species of yeast widely used in baking, brewing, and scientific research as a model eukaryotic organism.
-
D.
Lachancea kluyveri
Lachancea kluyveri is a species of budding yeast used as a model organism in genetics and evolutionary biology, particularly for studying genome evolution and metabolic diversity.
-
E.
Saccharomyces bayanus
Saccharomyces bayanus is a species of yeast commonly used in winemaking and cider fermentation due to its tolerance to low temperatures and high alcohol levels.
- F. None of above. chosen
Provenance (2 batches)
The batch behind each pipeline step, in order, with when it ran. Timestamps are batch-level — stages were processed in waves, so the object chain (NER → NED1 → NEDg → NED2) reads in order, but predicate / elicitation batches can sit in a different wave.
| Step | Stage | Batch ID | Status | When |
|---|---|---|---|---|
| creating | Elicitation | batch_69e2454a158c819093b8e35f5045efb6 |
completed | April 17, 2026, 2:35 p.m. |
| NER | Named-entity recognition | batch_69f1765fe7d081908087778c54c1e612 |
completed | April 29, 2026, 3:09 a.m. |
Created at: April 17, 2026, 3:07 p.m.