Triple
T21466461
| Position | Surface form | Disambiguated ID | Type / Status |
|---|---|---|---|
| Subject | Biomphalaria glabrata |
E529604
|
entity |
| Predicate | associatedPathogen |
P63527
|
FINISHED |
| Object | Schistosoma mansoni |
—
|
NE NERFINISHED |
How this triple was built (3 steps)
Every LLM step that produced this triple, in pipeline order — named-entity classification, the disambiguation choices (the exact options shown, with the pick highlighted), and the generated description. The batch + timestamp of each is in the Provenance table below.
NER
Named-entity recognition
gpt-5-mini
Instruction
Given a phrase, classify it is english named entity (e.g., persons, organizations, works of art) in Latin script, or not (e.g., literals, dates, URLs, verbose phrases). For disambiguation, the statement where the phrase occurs as object is also given. Please return a JSON object with `phrase` (string, the phrase being analyzed) and `is_ne` (boolean, indicating whether the phrase is a Named Entity).
Input
Phrase: Schistosoma mansoni | Statement: [Biomphalaria glabrata, associatedPathogen, Schistosoma mansoni]
NED1
Entity disambiguation (via context triple)
gpt-5-mini-2025-08-07
Target entity: Schistosoma mansoni Context triple: [Biomphalaria glabrata, associatedPathogen, Schistosoma mansoni]
-
A.
Schistosoma mansoni
chosen
Schistosoma mansoni is a parasitic blood fluke that infects humans and causes intestinal schistosomiasis, a significant neglected tropical disease.
-
B.
Brugia
Brugia is a genus of parasitic filarial nematodes best known for causing lymphatic filariasis in humans and animals.
-
C.
Brugia malayi
Brugia malayi is a parasitic roundworm that infects humans and causes lymphatic filariasis, a tropical disease characterized by swelling and damage to the lymphatic system.
-
D.
Schistosomatidae
Schistosomatidae is a family of parasitic blood flukes (trematodes) that infect vertebrate hosts, including humans, and cause schistosomiasis.
-
E.
Brugia timori
Brugia timori is a parasitic filarial nematode that infects humans and causes timorian filariasis, a form of lymphatic filariasis found primarily in parts of Indonesia.
- F. None of above.
- G. Unsure - the case is ambiguous/there is not enough information to decide.
PD
Predicate disambiguation
gpt-5-mini-2025-08-07
Target predicate: associatedPathogen Context triple: [Biomphalaria glabrata, associatedPathogen, Schistosoma mansoni]
-
A.
isPathogenOf
Indicates that one entity is a disease-causing agent (pathogen) that infects or causes illness in another entity.
-
B.
pathogenType
Indicates the specific kind or category of pathogen associated with or responsible for an entity or condition.
-
C.
addressesPathogen
Indicates that an action, intervention, or measure is directed toward counteracting, managing, or mitigating a specific pathogen.
-
D.
includesPathogensOf
Indicates that one entity contains or encompasses the pathogens that are associated with or originate from another entity.
-
E.
carriesPathogen
chosen
Indicates that one entity harbors and can transmit a disease-causing pathogen to another entity or environment.
- F. None of above.
Provenance (3 batches)
The batch behind each pipeline step, in order, with when it ran. Timestamps are batch-level — stages were processed in waves, so the object chain (NER → NED1 → NEDg → NED2) reads in order, but predicate / elicitation batches can sit in a different wave.
| Step | Stage | Batch ID | Status | When |
|---|---|---|---|---|
| creating | Elicitation | batch_69e0c458133481908ae8b41a12c4edec |
completed | April 16, 2026, 11:13 a.m. |
| NER | Named-entity recognition | batch_69e9e9f32b5c8190bfa5acb3c9b1ab3b |
completed | April 23, 2026, 9:44 a.m. |
| PD | Predicate disambiguation | batch_69e631ec1d048190b6da97da8222e413 |
completed | April 20, 2026, 2:02 p.m. |
Created at: April 16, 2026, 6:11 p.m.