Triple

T2108033
Position Surface form Disambiguated ID Type / Status
Subject Thaumarchaeota E42438 entity
Predicate hasRepresentativeGenus P5980 FINISHED
Object Nitrosopumilus
Nitrosopumilus is a genus of marine ammonia-oxidizing archaea that plays a key role in the global nitrogen cycle, particularly in oceanic environments.
E236119 NE FINISHED

How this triple was built (5 steps)

Every LLM step that produced this triple, in pipeline order — named-entity classification, the disambiguation choices (the exact options shown, with the pick highlighted), and the generated description. The batch + timestamp of each is in the Provenance table below.

NER Named-entity recognition gpt-5-mini
Instruction
Given a phrase, classify it is english named entity (e.g., persons, organizations, works of art) in Latin script, or not (e.g., literals, dates, URLs, verbose phrases). For disambiguation, the statement where the phrase occurs as object is also given. Please return a JSON object with `phrase` (string, the phrase being analyzed) and `is_ne` (boolean, indicating whether the phrase is a Named Entity).
Input
Phrase: Nitrosopumilus | Statement: [Thaumarchaeota, hasRepresentativeGenus, Nitrosopumilus]
NED1 Entity disambiguation (via context triple) gpt-5-mini-2025-08-07
Target entity: Nitrosopumilus
Context triple: [Thaumarchaeota, hasRepresentativeGenus, Nitrosopumilus]
  • A. Thaumarchaeota
    Thaumarchaeota are a phylum of Archaea known primarily for their role in ammonia oxidation and global nitrogen cycling in diverse environments.
  • B. Korarchaeota
    Korarchaeota are a deeply branching, poorly understood lineage of Archaea typically found in high-temperature environments and known mainly from environmental DNA rather than cultivated representatives.
  • C. Nanoarchaeota
    Nanoarchaeota is a phylum of ultra-small, symbiotic archaea known for their reduced genomes and association with other archaeal hosts in extreme environments.
  • D. Pyrobaculum aerophilum
    Pyrobaculum aerophilum is a hyperthermophilic archaeon that thrives in extremely high-temperature, often sulfur-rich environments and serves as a model organism for studying the biology of Crenarchaeota.
  • E. Campylobacterota
    Campylobacterota is a phylum of Gram-negative, often spiral-shaped bacteria that includes several important gastrointestinal pathogens affecting humans and animals.
  • F. None of above. chosen
  • G. Unsure - the case is ambiguous/there is not enough information to decide.
NEDg Description generation gpt-5.1
Instruction
Generate a one-sentence description of the target entity. 
You are given a context triple in the form (subject, predicate, object), where the object is the target entity. 
# Instructions
Use the triple to infer relevant information about the entity. Describe the entity based on what is most defining, well-known. 
Avoid repeating the information from the triple, unless really essential.
# Response Format
Return only the sentence: "Description: [one-sentence description of the target entity]"
Input
Entity: Nitrosopumilus
Triple: [Thaumarchaeota, hasRepresentativeGenus, Nitrosopumilus]
Generated description
Nitrosopumilus is a genus of marine ammonia-oxidizing archaea that plays a key role in the global nitrogen cycle, particularly in oceanic environments.
NED2 Entity disambiguation (via description) gpt-5-mini-2025-08-07
Target entity: Nitrosopumilus
Target entity description: Nitrosopumilus is a genus of marine ammonia-oxidizing archaea that plays a key role in the global nitrogen cycle, particularly in oceanic environments.
  • A. Thaumarchaeota
    Thaumarchaeota are a phylum of Archaea known primarily for their role in ammonia oxidation and global nitrogen cycling in diverse environments.
  • B. Korarchaeota
    Korarchaeota are a deeply branching, poorly understood lineage of Archaea typically found in high-temperature environments and known mainly from environmental DNA rather than cultivated representatives.
  • C. Nanoarchaeota
    Nanoarchaeota is a phylum of ultra-small, symbiotic archaea known for their reduced genomes and association with other archaeal hosts in extreme environments.
  • D. Pyrobaculum aerophilum
    Pyrobaculum aerophilum is a hyperthermophilic archaeon that thrives in extremely high-temperature, often sulfur-rich environments and serves as a model organism for studying the biology of Crenarchaeota.
  • E. Campylobacterota
    Campylobacterota is a phylum of Gram-negative, often spiral-shaped bacteria that includes several important gastrointestinal pathogens affecting humans and animals.
  • F. None of above. chosen
PD Predicate disambiguation gpt-5-mini-2025-08-07
Target predicate: hasRepresentativeGenus
Context triple: [Thaumarchaeota, hasRepresentativeGenus, Nitrosopumilus]
  • A. hasGenus
    Indicates that one entity belongs to, or is classified under, the biological genus represented by the other entity.
  • B. genusIncludes
    Indicates that a particular genus contains or encompasses the specified subordinate taxonomic entities (such as species or subspecies).
  • C. hasFlagshipSpecies
    Indicates that one entity (typically a site, region, or conservation program) is associated with or represented by a particular flagship species used to promote awareness or protection.
  • D. hasTypeGenus chosen
    Indicates that one entity is the type genus that formally defines or represents the taxonomic group of the other entity.
  • E. notableGenus
    Indicates that one entity is a genus that is especially prominent, well-known, or significant in relation to the other entity.
  • F. None of above.

Provenance (6 batches)

The batch behind each pipeline step, in order, with when it ran. Timestamps are batch-level — stages were processed in waves, so the object chain (NER → NED1 → NEDg → NED2) reads in order, but predicate / elicitation batches can sit in a different wave.

Step Stage Batch ID Status When
creating Elicitation batch_69a8871040f08190aac2e2d0ab6b47ad completed March 4, 2026, 7:25 p.m.
NER Named-entity recognition batch_69abbae03f308190841f5a419bb821f6 completed March 7, 2026, 5:42 a.m.
NED1 Entity disambiguation (via context triple) batch_69ae51926e4481909dd148b5cab3b6ec completed March 9, 2026, 4:50 a.m.
NEDg Description generation batch_69ae5254e95881909ce695be86430c9d completed March 9, 2026, 4:53 a.m.
NED2 Entity disambiguation (via description) batch_69ae52d46ef48190bbd6b7cc9fcda2a4 completed March 9, 2026, 4:55 a.m.
PD Predicate disambiguation batch_69abb7b7b6288190afa11b4d93bd5666 completed March 7, 2026, 5:29 a.m.
Created at: March 4, 2026, 7:43 p.m.