Triple
T19992678
| Position | Surface form | Disambiguated ID | Type / Status |
|---|---|---|---|
| Subject | APOE ε3 allele |
E494101
|
entity |
| Predicate | associatedWithCardiovascularRiskRelativeToAPOE ε4 |
P60495
|
FINISHED |
| Object | lower risk |
—
|
LITERAL FINISHED |
How this triple was built (2 steps)
Every LLM step that produced this triple, in pipeline order — named-entity classification, the disambiguation choices (the exact options shown, with the pick highlighted), and the generated description. The batch + timestamp of each is in the Provenance table below.
NER
Named-entity recognition
gpt-5-mini
Instruction
Given a phrase, classify it is english named entity (e.g., persons, organizations, works of art) in Latin script, or not (e.g., literals, dates, URLs, verbose phrases). For disambiguation, the statement where the phrase occurs as object is also given. Please return a JSON object with `phrase` (string, the phrase being analyzed) and `is_ne` (boolean, indicating whether the phrase is a Named Entity).
Input
Phrase: lower risk | Statement: [APOE ε3 allele, associatedWithCardiovascularRiskRelativeToAPOE ε4, lower risk]
PD
Predicate disambiguation
gpt-5-mini-2025-08-07
Target predicate: associatedWithCardiovascularRiskRelativeToAPOE ε4 Context triple: [APOE ε3 allele, associatedWithCardiovascularRiskRelativeToAPOE ε4, lower risk]
-
A.
epidemiologicalRisk
chosen
Indicates a relationship where one entity poses or is associated with a potential risk of disease occurrence, transmission, or impact to another entity or population from an epidemiological perspective.
-
B.
riskFactorTypeStudied
Indicates that a particular type of risk factor is the subject of study or analysis in a given context.
-
C.
hasPharmacogenomicAssociation
Indicates that there is a documented relationship between a genetic variant and a drug’s response, efficacy, or toxicity.
-
D.
geneticAffinity
Indicates a relationship where entities share a notable degree of genetic similarity or relatedness.
-
E.
supercohort
Indicates a relationship where one cohort encompasses, aggregates, or is hierarchically above one or more other cohorts within a grouping or classification structure.
- F. None of above.
Provenance (3 batches)
The batch behind each pipeline step, in order, with when it ran. Timestamps are batch-level — stages were processed in waves, so the object chain (NER → NED1 → NEDg → NED2) reads in order, but predicate / elicitation batches can sit in a different wave.
| Step | Stage | Batch ID | Status | When |
|---|---|---|---|---|
| creating | Elicitation | batch_69da626a67648190af9653832a3aeced |
completed | April 11, 2026, 3:02 p.m. |
| NER | Named-entity recognition | batch_69e65fe10ffc81908c94168b0a8ea9c9 |
completed | April 20, 2026, 5:18 p.m. |
| PD | Predicate disambiguation | batch_69e537fd311881908448f2aea8b4812e |
completed | April 19, 2026, 8:15 p.m. |
Created at: April 11, 2026, 3:31 p.m.